Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxc11P31313 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxc11P31313 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxc11P31313 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Hoxc11P31313 Gm43029-201ENSMUST00000201829 1535 ntBASIC6.35□□□□□ -1.39
Hoxc11P31313 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxc11P31313 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Hoxc11P31313 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxc11P31313 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxc11P31313 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxc11P31313 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxc11P31313 Gm19210-201ENSMUST00000199562 1350 ntBASIC6.34□□□□□ -1.39
Hoxc11P31313 AC159006.2-201ENSMUST00000228734 4144 ntBASIC6.34□□□□□ -1.39
Hoxc11P31313 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxc11P31313 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxc11P31313 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxc11P31313 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxc11P31313 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxc11P31313 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxc11P31313 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxc11P31313 Gm38257-201ENSMUST00000195881 2761 ntBASIC6.34□□□□□ -1.39
Hoxc11P31313 Gm14610-201ENSMUST00000118358 966 ntBASIC6.34□□□□□ -1.39
Hoxc11P31313 Gm14930-201ENSMUST00000118864 652 ntBASIC6.34□□□□□ -1.39
Hoxc11P31313 n-R5s48-201ENSMUST00000122482 110 ntBASIC6.34□□□□□ -1.39
Hoxc11P31313 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxc11P31313 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC6.34□□□□□ -1.39
Hoxc11P31313 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC6.34□□□□□ -1.39
Hoxc11P31313 Gm25550-201ENSMUST00000158079 128 ntBASIC6.34□□□□□ -1.39
Hoxc11P31313 Gm10177-201ENSMUST00000160052 444 ntBASIC6.34□□□□□ -1.39
Hoxc11P31313 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC6.34□□□□□ -1.39
Hoxc11P31313 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Hoxc11P31313 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxc11P31313 Gm20432-201ENSMUST00000173716 250 ntBASIC6.34□□□□□ -1.39
Hoxc11P31313 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxc11P31313 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC6.34□□□□□ -1.39
Hoxc11P31313 Gm5260-201ENSMUST00000186157 949 ntBASIC6.34□□□□□ -1.39
Hoxc11P31313 Gm28439-201ENSMUST00000187714 876 ntBASIC6.34□□□□□ -1.39
Hoxc11P31313 Ighv1-14-201ENSMUST00000194015 402 ntBASIC6.34□□□□□ -1.39
Hoxc11P31313 Gm20177-201ENSMUST00000203705 334 ntBASIC6.34□□□□□ -1.39
Hoxc11P31313 Gm44538-201ENSMUST00000205615 348 ntBASIC6.34□□□□□ -1.39
Hoxc11P31313 Gm44849-201ENSMUST00000207595 484 ntBASIC6.34□□□□□ -1.39
Hoxc11P31313 Gm44548-201ENSMUST00000208929 192 ntBASIC6.34□□□□□ -1.39
Hoxc11P31313 AC154573.2-201ENSMUST00000224174 378 ntBASIC6.34□□□□□ -1.39
Hoxc11P31313 AC096628.1-201ENSMUST00000226060 641 ntBASIC6.34□□□□□ -1.39
Hoxc11P31313 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Hoxc11P31313 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Hoxc11P31313 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC6.34□□□□□ -1.39
Hoxc11P31313 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Hoxc11P31313 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxc11P31313 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Hoxc11P31313 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hoxc11P31313 Gm45073-201ENSMUST00000207688 4247 ntBASIC6.34□□□□□ -1.39
Hoxc11P31313 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC6.34□□□□□ -1.4
Hoxc11P31313 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Hoxc11P31313 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.4
Hoxc11P31313 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Hoxc11P31313 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Hoxc11P31313 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Hoxc11P31313 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxc11P31313 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxc11P31313 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxc11P31313 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxc11P31313 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxc11P31313 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Hoxc11P31313 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxc11P31313 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxc11P31313 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxc11P31313 Gm36947-201ENSMUST00000194709 2249 ntBASIC6.33□□□□□ -1.4
Hoxc11P31313 AC156636.2-201ENSMUST00000218845 4557 ntBASIC6.33□□□□□ -1.4
Hoxc11P31313 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxc11P31313 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Hoxc11P31313 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxc11P31313 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
Hoxc11P31313 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxc11P31313 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Hoxc11P31313 Gm24272-201ENSMUST00000102329 98 ntBASIC6.33□□□□□ -1.4
Hoxc11P31313 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Hoxc11P31313 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxc11P31313 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxc11P31313 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxc11P31313 Gm11462-201ENSMUST00000117749 562 ntBASIC6.33□□□□□ -1.4
Hoxc11P31313 Gm14788-201ENSMUST00000119457 375 ntBASIC6.33□□□□□ -1.4
Hoxc11P31313 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC6.33□□□□□ -1.4
Hoxc11P31313 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxc11P31313 Gm4997-201ENSMUST00000154056 360 ntBASIC6.33□□□□□ -1.4
Hoxc11P31313 Gm26167-201ENSMUST00000158423 253 ntBASIC6.33□□□□□ -1.4
Hoxc11P31313 Gm24735-201ENSMUST00000158859 118 ntBASIC6.33□□□□□ -1.4
Hoxc11P31313 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxc11P31313 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC6.33□□□□□ -1.4
Hoxc11P31313 Gm18447-201ENSMUST00000187501 307 ntBASIC6.33□□□□□ -1.4
Hoxc11P31313 Gm37177-201ENSMUST00000193768 417 ntBASIC6.33□□□□□ -1.4
Hoxc11P31313 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6.33□□□□□ -1.4
Hoxc11P31313 Gm43974-201ENSMUST00000205080 684 ntBASIC6.33□□□□□ -1.4
Hoxc11P31313 Gm45070-201ENSMUST00000208100 246 ntBASIC6.33□□□□□ -1.4
Hoxc11P31313 Gm5324-201ENSMUST00000208115 476 ntBASIC6.33□□□□□ -1.4
Hoxc11P31313 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC6.33□□□□□ -1.4
Hoxc11P31313 AC154806.1-203ENSMUST00000227370 1032 ntBASIC6.33□□□□□ -1.4
Hoxc11P31313 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Hoxc11P31313 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hoxc11P31313 Gm22351-201ENSMUST00000083925 107 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 100.8 ms