Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VimP20152 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.2□□□□□ -1.42
VimP20152 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
VimP20152 Gm13991-201ENSMUST00000120190 648 ntBASIC6.2□□□□□ -1.42
VimP20152 Gm11761-201ENSMUST00000121392 445 ntBASIC6.2□□□□□ -1.42
VimP20152 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VimP20152 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC6.2□□□□□ -1.42
VimP20152 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC6.2□□□□□ -1.42
VimP20152 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC6.2□□□□□ -1.42
VimP20152 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.2□□□□□ -1.42
VimP20152 Mir6239-201ENSMUST00000183564 105 ntBASIC6.2□□□□□ -1.42
VimP20152 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VimP20152 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VimP20152 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC6.2□□□□□ -1.42
VimP20152 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC6.2□□□□□ -1.42
VimP20152 Gm43383-201ENSMUST00000195981 469 ntBASIC6.2□□□□□ -1.42
VimP20152 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC6.2□□□□□ -1.42
VimP20152 Gm17824-201ENSMUST00000197690 805 ntBASIC6.2□□□□□ -1.42
VimP20152 Gm43089-201ENSMUST00000199162 275 ntBASIC6.2□□□□□ -1.42
VimP20152 Gm6649-201ENSMUST00000199743 1165 ntBASIC6.2□□□□□ -1.42
VimP20152 Gm42887-201ENSMUST00000202469 1119 ntBASIC6.2□□□□□ -1.42
VimP20152 Gm18871-201ENSMUST00000218655 745 ntBASIC6.2□□□□□ -1.42
VimP20152 AC141425.1-201ENSMUST00000224989 265 ntBASIC6.2□□□□□ -1.42
VimP20152 AC122035.2-201ENSMUST00000228698 462 ntBASIC6.2□□□□□ -1.42
VimP20152 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
VimP20152 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
VimP20152 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VimP20152 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VimP20152 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VimP20152 Gm43981-201ENSMUST00000203285 1467 ntBASIC6.2□□□□□ -1.42
VimP20152 Gm42819-201ENSMUST00000199630 5121 ntBASIC6.2□□□□□ -1.42
VimP20152 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
VimP20152 AC153912.2-201ENSMUST00000215840 2015 ntBASIC6.2□□□□□ -1.42
VimP20152 Gm44895-201ENSMUST00000206670 1538 ntBASIC6.2□□□□□ -1.42
VimP20152 AC153729.4-201ENSMUST00000217582 3826 ntBASIC6.19□□□□□ -1.42
VimP20152 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.19□□□□□ -1.42
VimP20152 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC6.19□□□□□ -1.42
VimP20152 Gm9839-201ENSMUST00000195252 1437 ntBASIC6.19□□□□□ -1.42
VimP20152 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VimP20152 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
VimP20152 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VimP20152 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VimP20152 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
VimP20152 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VimP20152 Gm11864-201ENSMUST00000116179 1220 ntBASIC6.19□□□□□ -1.42
VimP20152 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC6.19□□□□□ -1.42
VimP20152 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
VimP20152 Gm8855-201ENSMUST00000118888 878 ntBASIC6.19□□□□□ -1.42
VimP20152 Gm13900-201ENSMUST00000119402 498 ntBASIC6.19□□□□□ -1.42
VimP20152 Gm6620-201ENSMUST00000120113 715 ntBASIC6.19□□□□□ -1.42
VimP20152 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VimP20152 Gm10364-202ENSMUST00000153034 1001 ntBASIC6.19□□□□□ -1.42
VimP20152 Gm24685-201ENSMUST00000157764 285 ntBASIC6.19□□□□□ -1.42
VimP20152 Gm24363-201ENSMUST00000158440 311 ntBASIC6.19□□□□□ -1.42
VimP20152 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
VimP20152 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC6.19□□□□□ -1.42
VimP20152 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VimP20152 Gm20561-201ENSMUST00000188131 292 ntBASIC6.19□□□□□ -1.42
VimP20152 Gm28620-201ENSMUST00000190463 439 ntBASIC6.19□□□□□ -1.42
VimP20152 Gm37676-201ENSMUST00000195496 507 ntBASIC6.19□□□□□ -1.42
VimP20152 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VimP20152 Gm44112-201ENSMUST00000204787 372 ntBASIC6.19□□□□□ -1.42
VimP20152 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC6.19□□□□□ -1.42
VimP20152 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VimP20152 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC6.19□□□□□ -1.42
VimP20152 AC160338.3-201ENSMUST00000214836 384 ntBASIC6.19□□□□□ -1.42
VimP20152 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC6.19□□□□□ -1.42
VimP20152 AC159205.1-201ENSMUST00000225513 1099 ntBASIC6.19□□□□□ -1.42
VimP20152 AC158142.3-201ENSMUST00000226230 675 ntBASIC6.19□□□□□ -1.42
VimP20152 AC154806.1-203ENSMUST00000227370 1032 ntBASIC6.19□□□□□ -1.42
VimP20152 AC123658.1-201ENSMUST00000228364 867 ntBASIC6.19□□□□□ -1.42
VimP20152 AC131586.4-201ENSMUST00000228424 668 ntBASIC6.19□□□□□ -1.42
VimP20152 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VimP20152 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VimP20152 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
VimP20152 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
VimP20152 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
VimP20152 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VimP20152 Gm43887-201ENSMUST00000204727 3186 ntBASIC6.19□□□□□ -1.42
VimP20152 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VimP20152 AC156569.1-201ENSMUST00000222020 3841 ntBASIC6.19□□□□□ -1.42
VimP20152 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VimP20152 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VimP20152 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VimP20152 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
VimP20152 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VimP20152 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
VimP20152 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VimP20152 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
VimP20152 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VimP20152 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC6.18□□□□□ -1.42
VimP20152 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VimP20152 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VimP20152 AC124569.3-201ENSMUST00000224860 1621 ntBASIC6.18□□□□□ -1.42
VimP20152 Gm37370-201ENSMUST00000191996 1410 ntBASIC6.18□□□□□ -1.42
VimP20152 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
VimP20152 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
VimP20152 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
VimP20152 Gm37056-201ENSMUST00000192141 1865 ntBASIC6.18□□□□□ -1.42
VimP20152 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms