Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC5.55□□□□□ -1.52
P20040 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
P20040 Gm37103-201ENSMUST00000191830 115 ntBASIC5.55□□□□□ -1.52
P20040 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC5.55□□□□□ -1.52
P20040 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC5.55□□□□□ -1.52
P20040 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC5.55□□□□□ -1.52
P20040 Gm7769-201ENSMUST00000212900 933 ntBASIC5.55□□□□□ -1.52
P20040 Gm46364-201ENSMUST00000218548 319 ntBASIC5.55□□□□□ -1.52
P20040 Gm18620-201ENSMUST00000222295 324 ntBASIC5.55□□□□□ -1.52
P20040 CT009713.1-201ENSMUST00000224828 853 ntBASIC5.55□□□□□ -1.52
P20040 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC5.55□□□□□ -1.52
P20040 Gm21731-201ENSMUST00000079524 489 ntBASIC5.55□□□□□ -1.52
P20040 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
P20040 Olfr687-201ENSMUST00000098154 938 ntBASIC5.55□□□□□ -1.52
P20040 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
P20040 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
P20040 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
P20040 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
P20040 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
P20040 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
P20040 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
P20040 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
P20040 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
P20040 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
P20040 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
P20040 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
P20040 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC5.55□□□□□ -1.52
P20040 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC5.55□□□□□ -1.52
P20040 Phxr4-202ENSMUST00000216590 1391 ntBASIC5.55□□□□□ -1.52
P20040 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
P20040 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
P20040 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
P20040 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC5.54□□□□□ -1.52
P20040 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
P20040 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
P20040 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
P20040 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
P20040 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
P20040 Gm44255-201ENSMUST00000203456 2053 ntBASIC5.54□□□□□ -1.52
P20040 Gm45061-201ENSMUST00000204395 2095 ntBASIC5.54□□□□□ -1.52
P20040 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
P20040 Gm37730-201ENSMUST00000192432 2211 ntBASIC5.54□□□□□ -1.52
P20040 Gm38257-201ENSMUST00000195881 2761 ntBASIC5.54□□□□□ -1.52
P20040 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
P20040 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
P20040 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
P20040 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC5.54□□□□□ -1.52
P20040 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC5.54□□□□□ -1.52
P20040 Gm14038-201ENSMUST00000121500 807 ntBASIC5.54□□□□□ -1.52
P20040 Gm15164-201ENSMUST00000122203 271 ntBASIC5.54□□□□□ -1.52
P20040 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
P20040 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
P20040 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC5.54□□□□□ -1.52
P20040 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC5.54□□□□□ -1.52
P20040 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC5.54□□□□□ -1.52
P20040 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC5.54□□□□□ -1.52
P20040 Gm22820-201ENSMUST00000157205 329 ntBASIC5.54□□□□□ -1.52
P20040 Gm23071-201ENSMUST00000158242 115 ntBASIC5.54□□□□□ -1.52
P20040 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
P20040 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
P20040 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
P20040 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
P20040 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC5.54□□□□□ -1.52
P20040 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
P20040 Gm1969-201ENSMUST00000198125 1220 ntBASIC5.54□□□□□ -1.52
P20040 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC5.54□□□□□ -1.52
P20040 Ighv1-83-201ENSMUST00000199643 351 ntBASIC5.54□□□□□ -1.52
P20040 Gm45156-201ENSMUST00000207255 439 ntBASIC5.54□□□□□ -1.52
P20040 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
P20040 AC158750.1-201ENSMUST00000226163 634 ntBASIC5.54□□□□□ -1.52
P20040 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
P20040 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
P20040 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
P20040 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
P20040 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
P20040 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
P20040 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
P20040 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
P20040 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
P20040 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
P20040 Fam35a-206ENSMUST00000228626 3100 ntBASIC5.54□□□□□ -1.52
P20040 Gm38277-201ENSMUST00000195172 1367 ntBASIC5.54□□□□□ -1.52
P20040 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC5.54□□□□□ -1.52
P20040 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
P20040 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC5.53□□□□□ -1.52
P20040 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC5.53□□□□□ -1.52
P20040 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
P20040 Gm44697-201ENSMUST00000207756 1679 ntBASIC5.53□□□□□ -1.52
P20040 Gm4994-201ENSMUST00000118379 2187 ntBASIC5.53□□□□□ -1.52
P20040 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
P20040 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
P20040 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC5.53□□□□□ -1.52
P20040 Gm38105-201ENSMUST00000192112 2621 ntBASIC5.53□□□□□ -1.52
P20040 Gm37079-201ENSMUST00000194114 2135 ntBASIC5.53□□□□□ -1.52
P20040 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
P20040 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
P20040 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
P20040 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
P20040 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
P20040 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms