Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Chmp6P0C0A3 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.78□□□□□ -1.32
Chmp6P0C0A3 Mir1960-201ENSMUST00000157488 78 ntBASIC6.78□□□□□ -1.32
Chmp6P0C0A3 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Chmp6P0C0A3 Gm37189-201ENSMUST00000192131 298 ntBASIC6.78□□□□□ -1.32
Chmp6P0C0A3 Gm37376-201ENSMUST00000192176 453 ntBASIC6.78□□□□□ -1.32
Chmp6P0C0A3 Gm37770-201ENSMUST00000192855 772 ntBASIC6.78□□□□□ -1.32
Chmp6P0C0A3 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Chmp6P0C0A3 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC6.78□□□□□ -1.32
Chmp6P0C0A3 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Chmp6P0C0A3 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Chmp6P0C0A3 AC124183.1-201ENSMUST00000222367 2135 ntBASIC6.78□□□□□ -1.32
Chmp6P0C0A3 AC154481.1-201ENSMUST00000223532 331 ntBASIC6.78□□□□□ -1.32
Chmp6P0C0A3 AC154250.1-201ENSMUST00000224775 489 ntBASIC6.78□□□□□ -1.32
Chmp6P0C0A3 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.78□□□□□ -1.32
Chmp6P0C0A3 AC116596.2-203ENSMUST00000227345 731 ntBASIC6.78□□□□□ -1.32
Chmp6P0C0A3 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Chmp6P0C0A3 Gm15732-201ENSMUST00000079794 480 ntBASIC6.78□□□□□ -1.32
Chmp6P0C0A3 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Chmp6P0C0A3 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
Chmp6P0C0A3 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Chmp6P0C0A3 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6.77□□□□□ -1.33
Chmp6P0C0A3 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 AC098728.1-202ENSMUST00000226656 2198 ntBASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Gm25346-201ENSMUST00000104509 128 ntBASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Gm22103-201ENSMUST00000116733 121 ntBASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Gm26475-201ENSMUST00000116769 121 ntBASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Gm23620-201ENSMUST00000116812 121 ntBASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Gm25042-201ENSMUST00000116856 121 ntBASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Gm25540-201ENSMUST00000116880 121 ntBASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Gm22710-201ENSMUST00000116892 125 ntBASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Gm15901-201ENSMUST00000117663 941 ntBASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Gm11485-201ENSMUST00000120048 1175 ntBASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Gm6977-201ENSMUST00000121568 512 ntBASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Gm5125-201ENSMUST00000148614 624 ntBASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Gm23550-201ENSMUST00000179003 121 ntBASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Gm25123-201ENSMUST00000179154 121 ntBASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Gm25353-201ENSMUST00000179366 121 ntBASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Gm22992-201ENSMUST00000179496 121 ntBASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Gm25892-201ENSMUST00000179867 121 ntBASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Gm24092-201ENSMUST00000180257 121 ntBASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Gm9658-201ENSMUST00000182757 1012 ntBASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Gm7492-201ENSMUST00000201745 725 ntBASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Gm5027-201ENSMUST00000206700 375 ntBASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 AC139197.1-201ENSMUST00000228332 813 ntBASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Chmp6P0C0A3 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Gm36947-201ENSMUST00000194709 2249 ntBASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Chmp6P0C0A3 AC167013.5-201ENSMUST00000227597 2947 ntBASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Gm26162-201ENSMUST00000157793 132 ntBASIC6.76□□□□□ -1.33
Chmp6P0C0A3 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Chmp6P0C0A3 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Chmp6P0C0A3 AC135353.1-201ENSMUST00000215330 630 ntBASIC6.76□□□□□ -1.33
Chmp6P0C0A3 Gm9535-201ENSMUST00000218499 768 ntBASIC6.76□□□□□ -1.33
Chmp6P0C0A3 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms