Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
NclP09405 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
NclP09405 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
NclP09405 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
NclP09405 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC10.07□□□□□ -0.8
NclP09405 Gm11905-201ENSMUST00000117653 678 ntBASIC10.07□□□□□ -0.8
NclP09405 Gm15149-201ENSMUST00000119370 360 ntBASIC10.07□□□□□ -0.8
NclP09405 Gm12451-201ENSMUST00000121636 633 ntBASIC10.07□□□□□ -0.8
NclP09405 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
NclP09405 Gm15534-201ENSMUST00000137642 562 ntBASIC10.07□□□□□ -0.8
NclP09405 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC10.07□□□□□ -0.8
NclP09405 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
NclP09405 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC10.07□□□□□ -0.8
NclP09405 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC10.07□□□□□ -0.8
NclP09405 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
NclP09405 Gm27295-201ENSMUST00000184264 153 ntBASIC10.07□□□□□ -0.8
NclP09405 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC10.07□□□□□ -0.8
NclP09405 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC10.07□□□□□ -0.8
NclP09405 Gm37438-201ENSMUST00000192813 393 ntBASIC10.07□□□□□ -0.8
NclP09405 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC10.07□□□□□ -0.8
NclP09405 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
NclP09405 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC10.07□□□□□ -0.8
NclP09405 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
NclP09405 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
NclP09405 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC10.07□□□□□ -0.8
NclP09405 Gm45382-201ENSMUST00000210607 151 ntBASIC10.07□□□□□ -0.8
NclP09405 Gm45899-201ENSMUST00000212196 1276 ntBASIC10.07□□□□□ -0.8
NclP09405 Gm18892-201ENSMUST00000217628 881 ntBASIC10.07□□□□□ -0.8
NclP09405 AC124601.1-201ENSMUST00000220531 135 ntBASIC10.07□□□□□ -0.8
NclP09405 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC10.07□□□□□ -0.8
NclP09405 AC192616.1-201ENSMUST00000221922 132 ntBASIC10.07□□□□□ -0.8
NclP09405 AC123656.1-201ENSMUST00000227121 581 ntBASIC10.07□□□□□ -0.8
NclP09405 AC154484.2-201ENSMUST00000228359 818 ntBASIC10.07□□□□□ -0.8
NclP09405 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
NclP09405 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC10.07□□□□□ -0.8
NclP09405 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
NclP09405 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
NclP09405 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC10.07□□□□□ -0.8
NclP09405 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
NclP09405 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
NclP09405 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
NclP09405 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
NclP09405 Gm43845-201ENSMUST00000202462 1820 ntBASIC10.07□□□□□ -0.8
NclP09405 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
NclP09405 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
NclP09405 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
NclP09405 Gm43612-201ENSMUST00000196087 3207 ntBASIC10.07□□□□□ -0.8
NclP09405 AC155234.1-201ENSMUST00000225610 2823 ntBASIC10.06□□□□□ -0.8
NclP09405 Gm43771-201ENSMUST00000202931 1578 ntBASIC10.06□□□□□ -0.8
NclP09405 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
NclP09405 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
NclP09405 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
NclP09405 Gm13983-201ENSMUST00000118018 865 ntBASIC10.06□□□□□ -0.8
NclP09405 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC10.06□□□□□ -0.8
NclP09405 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC10.06□□□□□ -0.8
NclP09405 Gm15164-201ENSMUST00000122203 271 ntBASIC10.06□□□□□ -0.8
NclP09405 Gm13669-201ENSMUST00000122366 457 ntBASIC10.06□□□□□ -0.8
NclP09405 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
NclP09405 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC10.06□□□□□ -0.8
NclP09405 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
NclP09405 Gm5456-201ENSMUST00000170706 844 ntBASIC10.06□□□□□ -0.8
NclP09405 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC10.06□□□□□ -0.8
NclP09405 Gm23968-201ENSMUST00000175047 125 ntBASIC10.06□□□□□ -0.8
NclP09405 Gm18416-201ENSMUST00000175635 1003 ntBASIC10.06□□□□□ -0.8
NclP09405 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC10.06□□□□□ -0.8
NclP09405 Gm17045-201ENSMUST00000178600 844 ntBASIC10.06□□□□□ -0.8
NclP09405 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC10.06□□□□□ -0.8
NclP09405 Gm28356-202ENSMUST00000187566 858 ntBASIC10.06□□□□□ -0.8
NclP09405 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC10.06□□□□□ -0.8
NclP09405 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
NclP09405 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC10.06□□□□□ -0.8
NclP09405 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC10.06□□□□□ -0.8
NclP09405 Gm6841-201ENSMUST00000220602 598 ntBASIC10.06□□□□□ -0.8
NclP09405 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
NclP09405 Gm6575-201ENSMUST00000222946 697 ntBASIC10.06□□□□□ -0.8
NclP09405 Gm19154-201ENSMUST00000223330 940 ntBASIC10.06□□□□□ -0.8
NclP09405 AC154594.1-201ENSMUST00000225171 1273 ntBASIC10.06□□□□□ -0.8
NclP09405 AC154738.1-201ENSMUST00000227054 368 ntBASIC10.06□□□□□ -0.8
NclP09405 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
NclP09405 AC135086.1-201ENSMUST00000228621 817 ntBASIC10.06□□□□□ -0.8
NclP09405 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC10.06□□□□□ -0.8
NclP09405 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
NclP09405 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
NclP09405 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
NclP09405 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
NclP09405 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
NclP09405 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
NclP09405 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
NclP09405 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
NclP09405 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
NclP09405 Gm5702-201ENSMUST00000185629 2469 ntBASIC10.06□□□□□ -0.8
NclP09405 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
NclP09405 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC10.06□□□□□ -0.8
NclP09405 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC10.06□□□□□ -0.8
NclP09405 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
NclP09405 Gm2080-201ENSMUST00000211299 1573 ntBASIC10.05□□□□□ -0.8
NclP09405 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
NclP09405 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
NclP09405 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
NclP09405 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms