Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC6.25□□□□□ -1.41
Hoxd3P09027 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm17235-201ENSMUST00000169128 964 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm26197-201ENSMUST00000175033 115 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm22621-201ENSMUST00000179678 74 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 Mark1-ps3-201ENSMUST00000184922 694 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 Ly6a-202ENSMUST00000186526 862 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm6750-201ENSMUST00000189273 268 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm28193-201ENSMUST00000189863 615 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm36996-201ENSMUST00000194466 250 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 Trav3n-2-201ENSMUST00000197693 334 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC6.25□□□□□ -1.41
Hoxd3P09027 Trav3d-2-201ENSMUST00000199874 334 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm5314-201ENSMUST00000204852 466 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm30771-201ENSMUST00000205683 737 ntTSL 3 BASIC6.25□□□□□ -1.41
Hoxd3P09027 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm39121-201ENSMUST00000208847 525 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm45366-201ENSMUST00000209828 384 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm45283-201ENSMUST00000210593 628 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm21321-201ENSMUST00000220179 446 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 AC092710.1-201ENSMUST00000221005 192 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm7045-201ENSMUST00000221466 605 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 AC126805.1-201ENSMUST00000225142 262 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 CT009556.1-201ENSMUST00000227282 449 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 Gpihbp1-201ENSMUST00000023243 825 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Hoxd3P09027 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Hoxd3P09027 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Hoxd3P09027 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Hoxd3P09027 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm25141-201ENSMUST00000083177 107 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm10805-201ENSMUST00000099710 399 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm42658-201ENSMUST00000197199 1575 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Hoxd3P09027 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Hoxd3P09027 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Hoxd3P09027 Osbpl1a-202ENSMUST00000117361 2687 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Hoxd3P09027 Eif4e2-207ENSMUST00000113235 3473 ntTSL 5 BASIC6.25□□□□□ -1.41
Hoxd3P09027 Harbi1-205ENSMUST00000142692 3686 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Hoxd3P09027 C1qtnf7-201ENSMUST00000076939 3879 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm20388-201ENSMUST00000127664 3953 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Hoxd3P09027 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Hoxd3P09027 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Hoxd3P09027 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Hoxd3P09027 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Hoxd3P09027 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Hoxd3P09027 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Hoxd3P09027 Tyrp1-201ENSMUST00000006151 2720 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm42483-201ENSMUST00000197556 1742 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 CT030170.4-201ENSMUST00000221539 1538 ntTSL 5 BASIC6.25□□□□□ -1.41
Hoxd3P09027 Slc25a5-ps-203ENSMUST00000223928 1442 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 Rgs9-203ENSMUST00000106704 3464 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 Olfr632-203ENSMUST00000214711 3282 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Hoxd3P09027 Btbd18-201ENSMUST00000133437 3052 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Hoxd3P09027 Olfr1395-202ENSMUST00000203377 2883 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 3830406C13Rik-201ENSMUST00000112669 2477 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 3830406C13Rik-202ENSMUST00000163392 2452 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 Fgfbp1-202ENSMUST00000199481 2191 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Hoxd3P09027 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 Cpa5-203ENSMUST00000115139 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 4930447C04Rik-208ENSMUST00000136075 1970 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 Olfr1360-202ENSMUST00000205788 1988 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Hoxd3P09027 Mroh4-202ENSMUST00000137963 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 Olfr1198-202ENSMUST00000215179 3145 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Hoxd3P09027 Oca2-201ENSMUST00000032633 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Hoxd3P09027 Tespa1-201ENSMUST00000042586 1663 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 Magea2-201ENSMUST00000069477 1685 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Hoxd3P09027 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm38278-201ENSMUST00000194715 1365 ntBASIC6.24□□□□□ -1.41
Hoxd3P09027 Lrrc66-201ENSMUST00000087177 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 Ighv5-6-201ENSMUST00000103446 353 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Hoxd3P09027 Zfp467-207ENSMUST00000114563 463 ntTSL 5 BASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm14510-201ENSMUST00000116165 1092 ntBASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm14279-201ENSMUST00000117142 332 ntBASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm15715-201ENSMUST00000118032 283 ntBASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm13503-201ENSMUST00000119017 446 ntBASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm6798-201ENSMUST00000119961 360 ntBASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm22479-201ENSMUST00000122566 81 ntBASIC6.24□□□□□ -1.41
Hoxd3P09027 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Hoxd3P09027 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm10157-201ENSMUST00000139408 343 ntBASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm7393-201ENSMUST00000172650 739 ntBASIC6.24□□□□□ -1.41
Hoxd3P09027 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC6.24□□□□□ -1.41
Hoxd3P09027 Gm24465-201ENSMUST00000178398 107 ntBASIC6.24□□□□□ -1.41
Hoxd3P09027 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms