Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
Hmgb3O54879 Mir674-201ENSMUST00000102421 100 ntBASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm24888-201ENSMUST00000104387 130 ntBASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
Hmgb3O54879 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm11911-201ENSMUST00000117938 1023 ntBASIC4.99□□□□□ -1.61
Hmgb3O54879 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm11617-201ENSMUST00000119609 639 ntBASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm4234-201ENSMUST00000119747 714 ntBASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm14614-201ENSMUST00000119873 384 ntBASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm14515-201ENSMUST00000121327 216 ntBASIC4.99□□□□□ -1.61
Hmgb3O54879 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm16138-201ENSMUST00000159341 821 ntBASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm16113-201ENSMUST00000159629 372 ntBASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Hmgb3O54879 Mir3473e-201ENSMUST00000183932 110 ntBASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm5853-201ENSMUST00000197183 632 ntBASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm17824-201ENSMUST00000197690 805 ntBASIC4.99□□□□□ -1.61
Hmgb3O54879 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm29778-201ENSMUST00000201667 466 ntBASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm4270-201ENSMUST00000209666 406 ntBASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC4.99□□□□□ -1.61
Hmgb3O54879 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC4.99□□□□□ -1.61
Hmgb3O54879 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC4.99□□□□□ -1.61
Hmgb3O54879 AC124184.1-201ENSMUST00000218167 283 ntBASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm3785-201ENSMUST00000221000 202 ntBASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Hmgb3O54879 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Hmgb3O54879 n-R5s180-201ENSMUST00000082770 106 ntBASIC4.99□□□□□ -1.61
Hmgb3O54879 Mir3068-201ENSMUST00000083004 136 ntBASIC4.99□□□□□ -1.61
Hmgb3O54879 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hmgb3O54879 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Hmgb3O54879 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC4.99□□□□□ -1.61
Hmgb3O54879 AC105407.2-201ENSMUST00000223707 3911 ntBASIC4.99□□□□□ -1.61
Hmgb3O54879 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Hmgb3O54879 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hmgb3O54879 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Hmgb3O54879 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Hmgb3O54879 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hmgb3O54879 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Hmgb3O54879 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hmgb3O54879 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm43190-201ENSMUST00000187850 1779 ntBASIC4.99□□□□□ -1.61
Hmgb3O54879 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Hmgb3O54879 Gm43523-201ENSMUST00000197397 2878 ntBASIC4.98□□□□□ -1.61
Hmgb3O54879 Gm38062-201ENSMUST00000192541 1856 ntBASIC4.98□□□□□ -1.61
Hmgb3O54879 Gm45632-201ENSMUST00000211532 1888 ntBASIC4.98□□□□□ -1.61
Hmgb3O54879 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Hmgb3O54879 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Hmgb3O54879 Wnk1-218ENSMUST00000161512 1426 ntBASIC4.98□□□□□ -1.61
Hmgb3O54879 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Hmgb3O54879 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Hmgb3O54879 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Hmgb3O54879 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Hmgb3O54879 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC4.98□□□□□ -1.61
Hmgb3O54879 Gm15583-201ENSMUST00000116191 3510 ntBASIC4.98□□□□□ -1.61
Hmgb3O54879 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Hmgb3O54879 Gm24989-201ENSMUST00000104461 88 ntBASIC4.98□□□□□ -1.61
Hmgb3O54879 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC4.98□□□□□ -1.61
Hmgb3O54879 Gm13193-201ENSMUST00000117275 225 ntBASIC4.98□□□□□ -1.61
Hmgb3O54879 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC4.98□□□□□ -1.61
Hmgb3O54879 Gm7700-201ENSMUST00000120273 970 ntBASIC4.98□□□□□ -1.61
Hmgb3O54879 Gm14465-201ENSMUST00000120603 567 ntBASIC4.98□□□□□ -1.61
Hmgb3O54879 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC4.98□□□□□ -1.61
Hmgb3O54879 Gm4764-201ENSMUST00000130207 1233 ntBASIC4.98□□□□□ -1.61
Hmgb3O54879 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Hmgb3O54879 Gm23553-201ENSMUST00000157817 295 ntBASIC4.98□□□□□ -1.61
Hmgb3O54879 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC4.98□□□□□ -1.61
Hmgb3O54879 Gm22701-201ENSMUST00000175371 291 ntBASIC4.98□□□□□ -1.61
Hmgb3O54879 Gm27193-201ENSMUST00000184217 586 ntBASIC4.98□□□□□ -1.61
Hmgb3O54879 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Hmgb3O54879 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Hmgb3O54879 Gm3121-201ENSMUST00000187086 406 ntBASIC4.98□□□□□ -1.61
Hmgb3O54879 Gm28846-201ENSMUST00000189161 368 ntBASIC4.98□□□□□ -1.61
Hmgb3O54879 Gm37725-201ENSMUST00000193965 2125 ntBASIC4.98□□□□□ -1.61
Hmgb3O54879 Gm5711-201ENSMUST00000197896 421 ntBASIC4.98□□□□□ -1.61
Hmgb3O54879 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC4.98□□□□□ -1.61
Hmgb3O54879 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC4.98□□□□□ -1.61
Hmgb3O54879 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC4.98□□□□□ -1.61
Hmgb3O54879 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Hmgb3O54879 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Hmgb3O54879 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC4.98□□□□□ -1.61
Hmgb3O54879 AC155709.1-201ENSMUST00000218794 162 ntBASIC4.98□□□□□ -1.61
Hmgb3O54879 Gm9237-201ENSMUST00000221499 548 ntBASIC4.98□□□□□ -1.61
Hmgb3O54879 AC153152.2-201ENSMUST00000223165 959 ntBASIC4.98□□□□□ -1.61
Hmgb3O54879 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC4.98□□□□□ -1.61
Hmgb3O54879 AC161877.2-201ENSMUST00000226248 545 ntBASIC4.98□□□□□ -1.61
Hmgb3O54879 AC115304.1-202ENSMUST00000226850 837 ntBASIC4.98□□□□□ -1.61
Hmgb3O54879 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Hmgb3O54879 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Hmgb3O54879 Gm25852-201ENSMUST00000082790 130 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms