Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trim3Q9R1R2 AC154755.1-201ENSMUST00000225244 537 ntBASIC5.97□□□□□ -1.45
Trim3Q9R1R2 AC105324.1-201ENSMUST00000227844 386 ntBASIC5.97□□□□□ -1.45
Trim3Q9R1R2 AC135086.1-201ENSMUST00000228621 817 ntBASIC5.97□□□□□ -1.45
Trim3Q9R1R2 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim3Q9R1R2 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Trim3Q9R1R2 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Trim3Q9R1R2 Mir138-1-201ENSMUST00000083480 99 ntBASIC5.97□□□□□ -1.45
Trim3Q9R1R2 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim3Q9R1R2 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Trim3Q9R1R2 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trim3Q9R1R2 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trim3Q9R1R2 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim3Q9R1R2 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC5.97□□□□□ -1.45
Trim3Q9R1R2 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
Trim3Q9R1R2 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim3Q9R1R2 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim3Q9R1R2 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.97□□□□□ -1.45
Trim3Q9R1R2 Gm21122-201ENSMUST00000191548 3452 ntBASIC5.97□□□□□ -1.45
Trim3Q9R1R2 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim3Q9R1R2 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
Trim3Q9R1R2 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim3Q9R1R2 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim3Q9R1R2 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trim3Q9R1R2 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC5.96□□□□□ -1.45
Trim3Q9R1R2 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Trim3Q9R1R2 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Trim3Q9R1R2 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Trim3Q9R1R2 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Trim3Q9R1R2 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Trim3Q9R1R2 AC160029.1-201ENSMUST00000219628 2678 ntBASIC5.96□□□□□ -1.45
Trim3Q9R1R2 AC154630.1-201ENSMUST00000215334 2440 ntBASIC5.96□□□□□ -1.45
Trim3Q9R1R2 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Gm20644-201ENSMUST00000176721 2063 ntBASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Gm26422-201ENSMUST00000104276 132 ntBASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Gm14300-201ENSMUST00000120800 946 ntBASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Gm14747-201ENSMUST00000149888 984 ntBASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Gm9529-201ENSMUST00000177598 579 ntBASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Gm21877-201ENSMUST00000185640 694 ntBASIC5.96□□□□□ -1.46
Trim3Q9R1R2 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Gm29160-201ENSMUST00000190094 699 ntBASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC5.96□□□□□ -1.46
Trim3Q9R1R2 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC5.96□□□□□ -1.46
Trim3Q9R1R2 AC170086.2-201ENSMUST00000224733 803 ntBASIC5.96□□□□□ -1.46
Trim3Q9R1R2 AC113125.2-201ENSMUST00000226837 362 ntBASIC5.96□□□□□ -1.46
Trim3Q9R1R2 AC116591.1-201ENSMUST00000227919 351 ntBASIC5.96□□□□□ -1.46
Trim3Q9R1R2 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.96□□□□□ -1.46
Trim3Q9R1R2 n-R5s89-201ENSMUST00000083532 104 ntBASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim3Q9R1R2 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim3Q9R1R2 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Gm8401-201ENSMUST00000120248 1739 ntBASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim3Q9R1R2 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Phxr4-202ENSMUST00000216590 1391 ntBASIC5.95□□□□□ -1.46
Trim3Q9R1R2 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Gm10826-201ENSMUST00000215366 3304 ntBASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Gm13604-201ENSMUST00000119332 482 ntBASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Gm25057-201ENSMUST00000157366 88 ntBASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Gm23674-201ENSMUST00000157473 131 ntBASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Gm8895-201ENSMUST00000172300 1223 ntBASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC5.95□□□□□ -1.46
Trim3Q9R1R2 Gm27006-201ENSMUST00000182218 943 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 106.8 ms