Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 AC131747.2-201ENSMUST00000226121 1895 ntBASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Gm8250-201ENSMUST00000117398 774 ntBASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Gm13772-201ENSMUST00000118431 317 ntBASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Gm13604-201ENSMUST00000119332 482 ntBASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Gm9005-201ENSMUST00000119908 607 ntBASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Gm44370-201ENSMUST00000175436 112 ntBASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Gm5853-201ENSMUST00000197183 632 ntBASIC5.88□□□□□ -1.47
Cdc40Q9DC48 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Gm46364-201ENSMUST00000218548 319 ntBASIC5.88□□□□□ -1.47
Cdc40Q9DC48 AC116319.2-201ENSMUST00000228159 984 ntBASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Gm10540-201ENSMUST00000097581 276 ntBASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cdc40Q9DC48 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Gm28874-201ENSMUST00000190917 3134 ntBASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Gm42544-201ENSMUST00000197868 3242 ntBASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Gm5387-201ENSMUST00000119776 857 ntBASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Gm6977-201ENSMUST00000121568 512 ntBASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Gm6067-201ENSMUST00000121648 491 ntBASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Gm11787-201ENSMUST00000121996 1050 ntBASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Gm12833-201ENSMUST00000136112 477 ntBASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Gm22235-201ENSMUST00000157085 110 ntBASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Gm18833-201ENSMUST00000173218 862 ntBASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Gm22701-201ENSMUST00000175371 291 ntBASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Gm27158-201ENSMUST00000183813 238 ntBASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Gm37103-201ENSMUST00000191830 115 ntBASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Gm37901-201ENSMUST00000195107 514 ntBASIC5.87□□□□□ -1.47
Cdc40Q9DC48 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Gm18805-201ENSMUST00000206872 655 ntBASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Gm18851-201ENSMUST00000210087 1058 ntBASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Gm18103-201ENSMUST00000216621 779 ntBASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Gm3266-201ENSMUST00000217832 591 ntBASIC5.87□□□□□ -1.47
Cdc40Q9DC48 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cdc40Q9DC48 AL671874.1-201ENSMUST00000223746 1123 ntBASIC5.87□□□□□ -1.47
Cdc40Q9DC48 AC161252.2-201ENSMUST00000224978 374 ntBASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Vmn1r41-205ENSMUST00000227630 827 ntBASIC5.87□□□□□ -1.47
Cdc40Q9DC48 AC154806.5-205ENSMUST00000228828 411 ntBASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC5.87□□□□□ -1.47
Cdc40Q9DC48 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cdc40Q9DC48 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cdc40Q9DC48 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms