Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Mir760-201ENSMUST00000103257 119 ntBASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Gm13196-201ENSMUST00000118297 379 ntBASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Gm15923-201ENSMUST00000119300 1169 ntBASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Gm12331-201ENSMUST00000119927 622 ntBASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Gm12879-201ENSMUST00000120003 1182 ntBASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Gm14369-201ENSMUST00000121355 285 ntBASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Gm24130-201ENSMUST00000158536 151 ntBASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Gm3326-201ENSMUST00000164656 1043 ntBASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Gm7502-201ENSMUST00000169235 733 ntBASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Trim11Q99PQ2 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Trim11Q99PQ2 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Gm28894-201ENSMUST00000185214 615 ntBASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Gm28489-201ENSMUST00000186655 316 ntBASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Gm37369-201ENSMUST00000194179 615 ntBASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Gm44931-201ENSMUST00000206056 545 ntBASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC7.96□□□□□ -1.14
Trim11Q99PQ2 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Trim11Q99PQ2 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Trim11Q99PQ2 AC151901.1-201ENSMUST00000218274 180 ntBASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Gm8616-201ENSMUST00000222175 1037 ntBASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC7.96□□□□□ -1.14
Trim11Q99PQ2 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Gm43395-201ENSMUST00000198717 2240 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC7.95□□□□□ -1.14
Trim11Q99PQ2 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Gm5512-202ENSMUST00000220222 1522 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Gm14615-201ENSMUST00000117575 1816 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Gm44231-201ENSMUST00000204106 4075 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Gm15054-201ENSMUST00000117393 281 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Gm11845-201ENSMUST00000117886 327 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Gm23426-201ENSMUST00000122483 318 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Gm26480-201ENSMUST00000122619 297 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 n-R5s30-201ENSMUST00000122624 122 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Gm23111-201ENSMUST00000122652 105 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Gm16248-201ENSMUST00000124238 243 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Gm9064-201ENSMUST00000163579 566 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Gm17038-201ENSMUST00000166586 494 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Gm6650-201ENSMUST00000166710 614 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Gm20637-201ENSMUST00000175715 462 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Gm4373-201ENSMUST00000178571 556 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Gm23139-201ENSMUST00000179454 132 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Mir7084-201ENSMUST00000183876 70 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Gm3121-201ENSMUST00000187086 406 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Gm29598-201ENSMUST00000188996 588 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Gm28414-201ENSMUST00000190111 294 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Gm4859-201ENSMUST00000199625 787 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC7.95□□□□□ -1.14
Trim11Q99PQ2 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC7.95□□□□□ -1.14
Trim11Q99PQ2 AL772397.1-201ENSMUST00000216707 606 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Gm6906-201ENSMUST00000218014 569 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 AC163621.1-201ENSMUST00000220695 379 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 AC211878.5-201ENSMUST00000221697 409 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Gm19340-201ENSMUST00000221995 345 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 CT009742.1-201ENSMUST00000222507 702 ntBASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Trim11Q99PQ2 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Trim11Q99PQ2 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms