Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Usp11Q99K46 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Usp11Q99K46 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.6□□□□□ -1.35
Usp11Q99K46 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Usp11Q99K46 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC6.6□□□□□ -1.35
Usp11Q99K46 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC6.6□□□□□ -1.35
Usp11Q99K46 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Usp11Q99K46 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Usp11Q99K46 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Usp11Q99K46 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Usp11Q99K46 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Usp11Q99K46 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Usp11Q99K46 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Usp11Q99K46 Gm43113-201ENSMUST00000199713 1754 ntBASIC6.59□□□□□ -1.35
Usp11Q99K46 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Usp11Q99K46 Gm11242-201ENSMUST00000120103 2457 ntBASIC6.59□□□□□ -1.35
Usp11Q99K46 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Usp11Q99K46 Gm44843-201ENSMUST00000208320 1396 ntBASIC6.59□□□□□ -1.35
Usp11Q99K46 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Usp11Q99K46 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Usp11Q99K46 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Usp11Q99K46 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Usp11Q99K46 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Usp11Q99K46 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Usp11Q99K46 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Usp11Q99K46 Gm13626-201ENSMUST00000119435 402 ntBASIC6.59□□□□□ -1.35
Usp11Q99K46 Gm14900-201ENSMUST00000120304 733 ntBASIC6.59□□□□□ -1.35
Usp11Q99K46 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Usp11Q99K46 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC6.59□□□□□ -1.35
Usp11Q99K46 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC6.59□□□□□ -1.35
Usp11Q99K46 n-R5s109-201ENSMUST00000179195 119 ntBASIC6.59□□□□□ -1.35
Usp11Q99K46 Gm8919-201ENSMUST00000182028 1014 ntBASIC6.59□□□□□ -1.35
Usp11Q99K46 Gm27158-201ENSMUST00000183813 238 ntBASIC6.59□□□□□ -1.35
Usp11Q99K46 Gm8480-201ENSMUST00000190350 698 ntBASIC6.59□□□□□ -1.35
Usp11Q99K46 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.59□□□□□ -1.35
Usp11Q99K46 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.59□□□□□ -1.35
Usp11Q99K46 Gm5853-201ENSMUST00000197183 632 ntBASIC6.59□□□□□ -1.35
Usp11Q99K46 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC6.59□□□□□ -1.35
Usp11Q99K46 Gm44361-201ENSMUST00000197960 94 ntBASIC6.59□□□□□ -1.35
Usp11Q99K46 Gm42799-201ENSMUST00000201331 328 ntBASIC6.59□□□□□ -1.35
Usp11Q99K46 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC6.59□□□□□ -1.35
Usp11Q99K46 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC6.59□□□□□ -1.35
Usp11Q99K46 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Usp11Q99K46 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC6.59□□□□□ -1.35
Usp11Q99K46 Mir138-1-201ENSMUST00000083480 99 ntBASIC6.59□□□□□ -1.35
Usp11Q99K46 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
Usp11Q99K46 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Usp11Q99K46 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
Usp11Q99K46 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Usp11Q99K46 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Usp11Q99K46 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Usp11Q99K46 AC130831.1-201ENSMUST00000224546 1474 ntBASIC6.59□□□□□ -1.36
Usp11Q99K46 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Usp11Q99K46 AC121870.1-201ENSMUST00000216279 4879 ntBASIC6.59□□□□□ -1.36
Usp11Q99K46 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.59□□□□□ -1.36
Usp11Q99K46 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Usp11Q99K46 Pramel-201ENSMUST00000118979 1383 ntBASIC6.58□□□□□ -1.36
Usp11Q99K46 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Usp11Q99K46 Gm15425-201ENSMUST00000119013 2711 ntBASIC6.58□□□□□ -1.36
Usp11Q99K46 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Usp11Q99K46 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Usp11Q99K46 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Usp11Q99K46 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Usp11Q99K46 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Usp11Q99K46 Gm43612-201ENSMUST00000196087 3207 ntBASIC6.58□□□□□ -1.36
Usp11Q99K46 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Usp11Q99K46 Gm9519-201ENSMUST00000206108 1337 ntBASIC6.58□□□□□ -1.36
Usp11Q99K46 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Usp11Q99K46 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Usp11Q99K46 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Usp11Q99K46 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Usp11Q99K46 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
Usp11Q99K46 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Usp11Q99K46 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Usp11Q99K46 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Usp11Q99K46 M6pr-ps-201ENSMUST00000120481 830 ntBASIC6.58□□□□□ -1.36
Usp11Q99K46 Gm12929-201ENSMUST00000122406 370 ntBASIC6.58□□□□□ -1.36
Usp11Q99K46 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC6.58□□□□□ -1.36
Usp11Q99K46 Gm25057-201ENSMUST00000157366 88 ntBASIC6.58□□□□□ -1.36
Usp11Q99K46 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Usp11Q99K46 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC6.58□□□□□ -1.36
Usp11Q99K46 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC6.58□□□□□ -1.36
Usp11Q99K46 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Usp11Q99K46 Gm23632-201ENSMUST00000175289 125 ntBASIC6.58□□□□□ -1.36
Usp11Q99K46 Gm9529-201ENSMUST00000177598 579 ntBASIC6.58□□□□□ -1.36
Usp11Q99K46 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
Usp11Q99K46 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.58□□□□□ -1.36
Usp11Q99K46 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC6.58□□□□□ -1.36
Usp11Q99K46 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC6.58□□□□□ -1.36
Usp11Q99K46 Gm44548-201ENSMUST00000208929 192 ntBASIC6.58□□□□□ -1.36
Usp11Q99K46 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC6.58□□□□□ -1.36
Usp11Q99K46 Gm18601-201ENSMUST00000220831 634 ntBASIC6.58□□□□□ -1.36
Usp11Q99K46 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Usp11Q99K46 CT030254.1-201ENSMUST00000225450 1078 ntBASIC6.58□□□□□ -1.36
Usp11Q99K46 AC122251.2-201ENSMUST00000227341 603 ntBASIC6.58□□□□□ -1.36
Usp11Q99K46 AC105324.1-201ENSMUST00000227844 386 ntBASIC6.58□□□□□ -1.36
Usp11Q99K46 AC154618.2-201ENSMUST00000228299 452 ntBASIC6.58□□□□□ -1.36
Usp11Q99K46 AC135086.1-201ENSMUST00000228621 817 ntBASIC6.58□□□□□ -1.36
Usp11Q99K46 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Usp11Q99K46 Gm10205-201ENSMUST00000087431 234 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms