Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CopaQ8CIE6 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.66□□□□□ -1.34
CopaQ8CIE6 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Gm15750-201ENSMUST00000120970 616 ntBASIC6.66□□□□□ -1.34
CopaQ8CIE6 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.66□□□□□ -1.34
CopaQ8CIE6 Gm18953-201ENSMUST00000175694 300 ntBASIC6.66□□□□□ -1.34
CopaQ8CIE6 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Gm20561-201ENSMUST00000188131 292 ntBASIC6.66□□□□□ -1.34
CopaQ8CIE6 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Gm38216-201ENSMUST00000194872 1214 ntBASIC6.66□□□□□ -1.34
CopaQ8CIE6 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Olfr809-203ENSMUST00000218237 1100 ntBASIC6.66□□□□□ -1.34
CopaQ8CIE6 AC154450.1-201ENSMUST00000220911 485 ntBASIC6.66□□□□□ -1.34
CopaQ8CIE6 AC125190.2-201ENSMUST00000221160 497 ntBASIC6.66□□□□□ -1.34
CopaQ8CIE6 Gm2139-201ENSMUST00000222569 1075 ntBASIC6.66□□□□□ -1.34
CopaQ8CIE6 Gm6575-201ENSMUST00000222946 697 ntBASIC6.66□□□□□ -1.34
CopaQ8CIE6 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Mir138-1-201ENSMUST00000083480 99 ntBASIC6.66□□□□□ -1.34
CopaQ8CIE6 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Gm6818-201ENSMUST00000190556 2558 ntBASIC6.66□□□□□ -1.34
CopaQ8CIE6 Gm4073-201ENSMUST00000176792 3500 ntBASIC6.66□□□□□ -1.34
CopaQ8CIE6 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.66□□□□□ -1.34
CopaQ8CIE6 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Gm15789-201ENSMUST00000118992 1359 ntBASIC6.66□□□□□ -1.34
CopaQ8CIE6 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CopaQ8CIE6 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CopaQ8CIE6 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CopaQ8CIE6 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.66□□□□□ -1.34
CopaQ8CIE6 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CopaQ8CIE6 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
CopaQ8CIE6 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
CopaQ8CIE6 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CopaQ8CIE6 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.65□□□□□ -1.34
CopaQ8CIE6 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
CopaQ8CIE6 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CopaQ8CIE6 Thap6-201ENSMUST00000191860 3151 ntBASIC6.65□□□□□ -1.34
CopaQ8CIE6 Mir711-201ENSMUST00000102188 82 ntBASIC6.65□□□□□ -1.34
CopaQ8CIE6 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
CopaQ8CIE6 Gm13983-201ENSMUST00000118018 865 ntBASIC6.65□□□□□ -1.34
CopaQ8CIE6 Gm15216-201ENSMUST00000118058 277 ntBASIC6.65□□□□□ -1.34
CopaQ8CIE6 Gm3931-201ENSMUST00000119038 455 ntBASIC6.65□□□□□ -1.34
CopaQ8CIE6 Gm12005-201ENSMUST00000121451 379 ntBASIC6.65□□□□□ -1.34
CopaQ8CIE6 Gm14840-201ENSMUST00000122135 594 ntBASIC6.65□□□□□ -1.34
CopaQ8CIE6 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CopaQ8CIE6 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CopaQ8CIE6 Gm25722-201ENSMUST00000157498 279 ntBASIC6.65□□□□□ -1.34
CopaQ8CIE6 Gm26353-201ENSMUST00000158224 255 ntBASIC6.65□□□□□ -1.34
CopaQ8CIE6 Gm5456-201ENSMUST00000170706 844 ntBASIC6.65□□□□□ -1.34
CopaQ8CIE6 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC6.65□□□□□ -1.34
CopaQ8CIE6 Gm17045-201ENSMUST00000178600 844 ntBASIC6.65□□□□□ -1.34
CopaQ8CIE6 Mir6244-201ENSMUST00000184156 117 ntBASIC6.65□□□□□ -1.34
CopaQ8CIE6 Gm27295-201ENSMUST00000184264 153 ntBASIC6.65□□□□□ -1.34
CopaQ8CIE6 Gm29072-201ENSMUST00000191149 678 ntBASIC6.65□□□□□ -1.34
CopaQ8CIE6 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC6.65□□□□□ -1.34
CopaQ8CIE6 Gm43576-201ENSMUST00000197937 871 ntBASIC6.65□□□□□ -1.34
CopaQ8CIE6 Gm42443-201ENSMUST00000198084 1155 ntBASIC6.65□□□□□ -1.34
CopaQ8CIE6 Gm44705-201ENSMUST00000206719 339 ntBASIC6.65□□□□□ -1.34
CopaQ8CIE6 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC6.65□□□□□ -1.34
CopaQ8CIE6 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.65□□□□□ -1.34
CopaQ8CIE6 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6.65□□□□□ -1.34
CopaQ8CIE6 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CopaQ8CIE6 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CopaQ8CIE6 AC132833.4-201ENSMUST00000228313 203 ntBASIC6.65□□□□□ -1.34
CopaQ8CIE6 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CopaQ8CIE6 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CopaQ8CIE6 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CopaQ8CIE6 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6.65□□□□□ -1.34
CopaQ8CIE6 Gm25587-201ENSMUST00000082498 166 ntBASIC6.65□□□□□ -1.34
CopaQ8CIE6 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
CopaQ8CIE6 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
CopaQ8CIE6 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.65□□□□□ -1.34
CopaQ8CIE6 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CopaQ8CIE6 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC6.65□□□□□ -1.35
CopaQ8CIE6 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.35
CopaQ8CIE6 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CopaQ8CIE6 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC6.65□□□□□ -1.35
CopaQ8CIE6 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.65□□□□□ -1.35
CopaQ8CIE6 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC6.65□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms