Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Gm20789-201ENSMUST00000221002 4195 ntBASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Gm11256-201ENSMUST00000118109 829 ntBASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Gm4152-201ENSMUST00000172675 259 ntBASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Gm8367-201ENSMUST00000186145 887 ntBASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Trub1Q8C0D0 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trub1Q8C0D0 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trub1Q8C0D0 AC153557.1-201ENSMUST00000217697 403 ntBASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC6.37□□□□□ -1.39
Trub1Q8C0D0 AC122459.2-201ENSMUST00000227099 638 ntBASIC6.37□□□□□ -1.39
Trub1Q8C0D0 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Gm22581-201ENSMUST00000083735 136 ntBASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.37□□□□□ -1.39
Trub1Q8C0D0 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Gm37023-201ENSMUST00000192895 2426 ntBASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Pramel-201ENSMUST00000118979 1383 ntBASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Gm14054-201ENSMUST00000120744 704 ntBASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Rps29-ps-201ENSMUST00000122083 172 ntBASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Scgb2b33-201ENSMUST00000187413 334 ntBASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Gm9127-201ENSMUST00000188041 985 ntBASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Gm37784-201ENSMUST00000193233 189 ntBASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Gm38237-201ENSMUST00000193366 376 ntBASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Gm5318-201ENSMUST00000205249 406 ntBASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Gm6009-201ENSMUST00000210848 280 ntBASIC6.36□□□□□ -1.39
Trub1Q8C0D0 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Gm7413-201ENSMUST00000219498 462 ntBASIC6.36□□□□□ -1.39
Trub1Q8C0D0 CT030238.4-202ENSMUST00000226143 745 ntBASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Gm37926-201ENSMUST00000191922 2424 ntBASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trub1Q8C0D0 Gm37086-201ENSMUST00000193082 3452 ntBASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Gm10826-201ENSMUST00000215366 3304 ntBASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Gm38284-201ENSMUST00000194803 4539 ntBASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.35□□□□□ -1.39
Trub1Q8C0D0 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 99.6 ms