Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Gm13566-201ENSMUST00000117428 1142 ntBASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Gm13678-201ENSMUST00000118926 340 ntBASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Gm24111-201ENSMUST00000175491 97 ntBASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Gm6055-201ENSMUST00000180532 378 ntBASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Gm42886-201ENSMUST00000199214 466 ntBASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Gm43894-201ENSMUST00000203274 688 ntBASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Gm6590-201ENSMUST00000203343 687 ntBASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Gm19653-201ENSMUST00000204326 1039 ntBASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC8.74□□□□□ -1.01
Usp40Q8BWR4 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Gm9088-201ENSMUST00000220237 508 ntBASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Gm18592-201ENSMUST00000221529 276 ntBASIC8.74□□□□□ -1.01
Usp40Q8BWR4 AC165260.1-201ENSMUST00000224127 683 ntBASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Gm24454-201ENSMUST00000083349 132 ntBASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
Usp40Q8BWR4 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Usp40Q8BWR4 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Usp40Q8BWR4 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Usp40Q8BWR4 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Usp40Q8BWR4 AC152922.2-201ENSMUST00000213353 3879 ntBASIC8.73□□□□□ -1.01
Usp40Q8BWR4 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC8.73□□□□□ -1.01
Usp40Q8BWR4 Gm16204-201ENSMUST00000117864 1897 ntBASIC8.73□□□□□ -1.01
Usp40Q8BWR4 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Usp40Q8BWR4 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Usp40Q8BWR4 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Usp40Q8BWR4 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Usp40Q8BWR4 Gm15403-201ENSMUST00000119343 1227 ntBASIC8.73□□□□□ -1.01
Usp40Q8BWR4 Gm14805-201ENSMUST00000120172 340 ntBASIC8.73□□□□□ -1.01
Usp40Q8BWR4 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC8.73□□□□□ -1.01
Usp40Q8BWR4 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Usp40Q8BWR4 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Usp40Q8BWR4 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Usp40Q8BWR4 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC8.73□□□□□ -1.01
Usp40Q8BWR4 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Usp40Q8BWR4 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Usp40Q8BWR4 Gm19214-201ENSMUST00000191956 1083 ntBASIC8.73□□□□□ -1.01
Usp40Q8BWR4 Gm37676-201ENSMUST00000195496 507 ntBASIC8.73□□□□□ -1.01
Usp40Q8BWR4 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC8.73□□□□□ -1.01
Usp40Q8BWR4 Gm10688-201ENSMUST00000214985 520 ntBASIC8.73□□□□□ -1.01
Usp40Q8BWR4 AC167222.2-201ENSMUST00000220014 295 ntBASIC8.73□□□□□ -1.01
Usp40Q8BWR4 Gm34165-201ENSMUST00000222012 1174 ntBASIC8.73□□□□□ -1.01
Usp40Q8BWR4 AC116319.2-201ENSMUST00000228159 984 ntBASIC8.73□□□□□ -1.01
Usp40Q8BWR4 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Usp40Q8BWR4 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Usp40Q8BWR4 n-R5s89-201ENSMUST00000083532 104 ntBASIC8.73□□□□□ -1.01
Usp40Q8BWR4 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Usp40Q8BWR4 Gm38082-201ENSMUST00000192800 6882 ntBASIC8.73□□□□□ -1.01
Usp40Q8BWR4 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Usp40Q8BWR4 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Usp40Q8BWR4 Gm43341-201ENSMUST00000200104 1308 ntBASIC8.73□□□□□ -1.01
Usp40Q8BWR4 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Usp40Q8BWR4 Gm43982-201ENSMUST00000204995 1829 ntBASIC8.73□□□□□ -1.01
Usp40Q8BWR4 Gm42852-201ENSMUST00000202649 1379 ntBASIC8.73□□□□□ -1.01
Usp40Q8BWR4 Gm37953-201ENSMUST00000195293 1884 ntBASIC8.72□□□□□ -1.01
Usp40Q8BWR4 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Usp40Q8BWR4 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Usp40Q8BWR4 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Usp40Q8BWR4 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Usp40Q8BWR4 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC8.72□□□□□ -1.01
Usp40Q8BWR4 Gm22372-201ENSMUST00000104589 136 ntBASIC8.72□□□□□ -1.01
Usp40Q8BWR4 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Usp40Q8BWR4 Gm11533-201ENSMUST00000120287 477 ntBASIC8.72□□□□□ -1.01
Usp40Q8BWR4 Gm9428-201ENSMUST00000127214 769 ntBASIC8.72□□□□□ -1.01
Usp40Q8BWR4 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC8.72□□□□□ -1.01
Usp40Q8BWR4 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
Usp40Q8BWR4 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC8.72□□□□□ -1.01
Usp40Q8BWR4 Gm17075-201ENSMUST00000171924 670 ntBASIC8.72□□□□□ -1.01
Usp40Q8BWR4 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Usp40Q8BWR4 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Usp40Q8BWR4 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Usp40Q8BWR4 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC8.72□□□□□ -1.01
Usp40Q8BWR4 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC8.72□□□□□ -1.01
Usp40Q8BWR4 Gm44559-201ENSMUST00000207177 1012 ntBASIC8.72□□□□□ -1.01
Usp40Q8BWR4 Gm19033-201ENSMUST00000208516 964 ntBASIC8.72□□□□□ -1.01
Usp40Q8BWR4 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC8.72□□□□□ -1.01
Usp40Q8BWR4 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC8.72□□□□□ -1.01
Usp40Q8BWR4 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC8.72□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms