Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm3140-201ENSMUST00000163523 481 ntBASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Gm6611-201ENSMUST00000163830 1272 ntBASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Gm29156-201ENSMUST00000187764 499 ntBASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Gm20561-201ENSMUST00000188131 292 ntBASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Gm37620-201ENSMUST00000192910 501 ntBASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Gm42464-202ENSMUST00000198111 774 ntBASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Gm42799-201ENSMUST00000201331 328 ntBASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Gm43867-201ENSMUST00000203860 525 ntBASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 AC134333.1-201ENSMUST00000204536 944 ntBASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Gm31711-201ENSMUST00000220687 196 ntBASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 AC211878.5-201ENSMUST00000221697 409 ntBASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 CT009711.2-201ENSMUST00000225352 934 ntBASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 CT030254.1-201ENSMUST00000225450 1078 ntBASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Anxa13-202ENSMUST00000227274 1201 ntBASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Gm24036-201ENSMUST00000082868 156 ntBASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Gm37755-201ENSMUST00000195880 2179 ntBASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Thap6-201ENSMUST00000191860 3151 ntBASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Gm24790-201ENSMUST00000104285 132 ntBASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Gm14733-201ENSMUST00000117680 133 ntBASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Gm13604-201ENSMUST00000119332 482 ntBASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Apc-ps1-201ENSMUST00000119356 470 ntBASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Gm11689-201ENSMUST00000120766 302 ntBASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Gm11787-201ENSMUST00000121996 1050 ntBASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Gm22235-201ENSMUST00000157085 110 ntBASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Gm18953-201ENSMUST00000175694 300 ntBASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Gm27186-201ENSMUST00000184223 307 ntBASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Gm37103-201ENSMUST00000191830 115 ntBASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Gm37439-201ENSMUST00000193150 856 ntBASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Gm37901-201ENSMUST00000195107 514 ntBASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Gm44227-201ENSMUST00000203576 241 ntBASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Gm44265-201ENSMUST00000203631 465 ntBASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Gm18586-201ENSMUST00000217265 518 ntBASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 AC124450.1-201ENSMUST00000225569 495 ntBASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Zfp865-202ENSMUST00000076791 1129 ntBASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Ccdc40Q8BI79 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Gm37864-201ENSMUST00000195308 3075 ntBASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Phxr4-202ENSMUST00000216590 1391 ntBASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Gm11976-201ENSMUST00000119236 295 ntBASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Gm5387-201ENSMUST00000119776 857 ntBASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Gm6620-201ENSMUST00000120113 715 ntBASIC6.61□□□□□ -1.35
Ccdc40Q8BI79 Gm11761-201ENSMUST00000121392 445 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms