Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
ClpbQ60649 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
ClpbQ60649 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ClpbQ60649 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ClpbQ60649 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
ClpbQ60649 n-R5s89-201ENSMUST00000083532 104 ntBASIC6.19□□□□□ -1.42
ClpbQ60649 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ClpbQ60649 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ClpbQ60649 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC6.19□□□□□ -1.42
ClpbQ60649 Gm43502-201ENSMUST00000200263 2596 ntBASIC6.19□□□□□ -1.42
ClpbQ60649 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
ClpbQ60649 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ClpbQ60649 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
ClpbQ60649 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ClpbQ60649 Gm17101-201ENSMUST00000169520 1588 ntBASIC6.18□□□□□ -1.42
ClpbQ60649 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ClpbQ60649 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ClpbQ60649 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.18□□□□□ -1.42
ClpbQ60649 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.18□□□□□ -1.42
ClpbQ60649 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.18□□□□□ -1.42
ClpbQ60649 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ClpbQ60649 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ClpbQ60649 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ClpbQ60649 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ClpbQ60649 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ClpbQ60649 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
ClpbQ60649 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ClpbQ60649 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
ClpbQ60649 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
ClpbQ60649 Gm14733-201ENSMUST00000117680 133 ntBASIC6.18□□□□□ -1.42
ClpbQ60649 Gm5793-201ENSMUST00000119393 630 ntBASIC6.18□□□□□ -1.42
ClpbQ60649 Gm13532-201ENSMUST00000120373 240 ntBASIC6.18□□□□□ -1.42
ClpbQ60649 Gm11472-201ENSMUST00000121305 556 ntBASIC6.18□□□□□ -1.42
ClpbQ60649 Gm12451-201ENSMUST00000121636 633 ntBASIC6.18□□□□□ -1.42
ClpbQ60649 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC6.18□□□□□ -1.42
ClpbQ60649 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ClpbQ60649 Gm23441-201ENSMUST00000157268 127 ntBASIC6.18□□□□□ -1.42
ClpbQ60649 Mir1953-201ENSMUST00000157866 89 ntBASIC6.18□□□□□ -1.42
ClpbQ60649 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ClpbQ60649 Gm25675-201ENSMUST00000174979 118 ntBASIC6.18□□□□□ -1.42
ClpbQ60649 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC6.18□□□□□ -1.42
ClpbQ60649 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
ClpbQ60649 Gm9274-201ENSMUST00000182505 984 ntBASIC6.18□□□□□ -1.42
ClpbQ60649 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ClpbQ60649 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ClpbQ60649 Gm28149-201ENSMUST00000187102 378 ntBASIC6.18□□□□□ -1.42
ClpbQ60649 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
ClpbQ60649 Gm28768-201ENSMUST00000189034 378 ntBASIC6.18□□□□□ -1.42
ClpbQ60649 Gm29784-201ENSMUST00000196217 406 ntBASIC6.18□□□□□ -1.42
ClpbQ60649 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
ClpbQ60649 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC6.18□□□□□ -1.42
ClpbQ60649 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC6.18□□□□□ -1.42
ClpbQ60649 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.18□□□□□ -1.42
ClpbQ60649 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ClpbQ60649 Gm18955-201ENSMUST00000223173 649 ntBASIC6.18□□□□□ -1.42
ClpbQ60649 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
ClpbQ60649 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC6.18□□□□□ -1.42
ClpbQ60649 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC6.18□□□□□ -1.42
ClpbQ60649 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC6.18□□□□□ -1.42
ClpbQ60649 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
ClpbQ60649 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ClpbQ60649 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
ClpbQ60649 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC6.18□□□□□ -1.42
ClpbQ60649 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
ClpbQ60649 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
ClpbQ60649 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ClpbQ60649 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.18□□□□□ -1.42
ClpbQ60649 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC6.18□□□□□ -1.42
ClpbQ60649 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ClpbQ60649 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ClpbQ60649 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ClpbQ60649 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
ClpbQ60649 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
ClpbQ60649 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ClpbQ60649 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
ClpbQ60649 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ClpbQ60649 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ClpbQ60649 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.17□□□□□ -1.42
ClpbQ60649 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ClpbQ60649 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ClpbQ60649 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
ClpbQ60649 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.17□□□□□ -1.42
ClpbQ60649 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC6.17□□□□□ -1.42
ClpbQ60649 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ClpbQ60649 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.17□□□□□ -1.42
ClpbQ60649 Gm37127-201ENSMUST00000192924 3036 ntBASIC6.17□□□□□ -1.42
ClpbQ60649 AU020206-202ENSMUST00000206358 3009 ntBASIC6.17□□□□□ -1.42
ClpbQ60649 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ClpbQ60649 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ClpbQ60649 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
ClpbQ60649 Gm14513-201ENSMUST00000117403 123 ntBASIC6.17□□□□□ -1.42
ClpbQ60649 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ClpbQ60649 Gm3931-201ENSMUST00000119038 455 ntBASIC6.17□□□□□ -1.42
ClpbQ60649 Gm15621-201ENSMUST00000119162 364 ntBASIC6.17□□□□□ -1.42
ClpbQ60649 Gm8312-201ENSMUST00000119380 618 ntBASIC6.17□□□□□ -1.42
ClpbQ60649 Gm14900-201ENSMUST00000120304 733 ntBASIC6.17□□□□□ -1.42
ClpbQ60649 Gm15164-201ENSMUST00000122203 271 ntBASIC6.17□□□□□ -1.42
ClpbQ60649 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC6.17□□□□□ -1.42
ClpbQ60649 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ClpbQ60649 Gm11545-201ENSMUST00000146507 375 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 99.3 ms