Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm2754-201ENSMUST00000223383 589 ntBASIC12.86□□□□□ -0.35
Trim41Q5NCC3 AC163667.1-201ENSMUST00000225201 1289 ntBASIC12.86□□□□□ -0.35
Trim41Q5NCC3 AV026068-229ENSMUST00000225516 595 ntBASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Gm37956-201ENSMUST00000195208 2010 ntBASIC12.86□□□□□ -0.35
Trim41Q5NCC3 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Gm42648-201ENSMUST00000200774 2505 ntBASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Ikbkg-201ENSMUST00000004330 6918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Rgs8-202ENSMUST00000111810 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Gm37647-201ENSMUST00000194556 3143 ntBASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Ceacam20-201ENSMUST00000094753 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Gm20731-201ENSMUST00000193462 2288 ntBASIC12.85□□□□□ -0.35
Trim41Q5NCC3 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Gm23942-201ENSMUST00000101956 107 ntBASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Gm25422-201ENSMUST00000104219 129 ntBASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Gm13640-201ENSMUST00000118445 264 ntBASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Gm12837-201ENSMUST00000120131 373 ntBASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Gm24517-201ENSMUST00000122560 107 ntBASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Gm23883-201ENSMUST00000122686 290 ntBASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Gm38373-201ENSMUST00000192042 288 ntBASIC12.85□□□□□ -0.35
Trim41Q5NCC3 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Gm7948-201ENSMUST00000212607 844 ntBASIC12.85□□□□□ -0.35
Trim41Q5NCC3 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 AC153847.1-201ENSMUST00000214524 353 ntBASIC12.85□□□□□ -0.35
Trim41Q5NCC3 AC164424.3-201ENSMUST00000220809 148 ntBASIC12.85□□□□□ -0.35
Trim41Q5NCC3 AC166358.8-201ENSMUST00000223288 105 ntBASIC12.85□□□□□ -0.35
Trim41Q5NCC3 AC124739.1-201ENSMUST00000223433 148 ntBASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Tpd52l2-204ENSMUST00000108800 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 CT010505.3-201ENSMUST00000227835 1651 ntBASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Gm38302-201ENSMUST00000191676 2076 ntBASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Gm42614-201ENSMUST00000198724 1554 ntBASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Abcg8-201ENSMUST00000045714 3667 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 AC120153.1-201ENSMUST00000226502 1311 ntBASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Rora-201ENSMUST00000034766 10878 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Arhgap12-212ENSMUST00000182559 4265 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim41Q5NCC3 Gm2108-201ENSMUST00000165058 2177 ntBASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim41Q5NCC3 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Dgkh-204ENSMUST00000227767 3319 ntBASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Gm22781-201ENSMUST00000104083 137 ntBASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Gm13486-201ENSMUST00000119910 282 ntBASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Gm12734-201ENSMUST00000120228 948 ntBASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Gm14787-201ENSMUST00000121236 388 ntBASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Gm25553-201ENSMUST00000158076 79 ntBASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Gm3208-201ENSMUST00000168281 427 ntBASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Gm25284-201ENSMUST00000180345 141 ntBASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Gm27804-201ENSMUST00000185135 119 ntBASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Gm18406-201ENSMUST00000185872 669 ntBASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Gm37260-201ENSMUST00000193748 1251 ntBASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Gm38279-201ENSMUST00000194067 1131 ntBASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Gm31230-201ENSMUST00000199725 785 ntBASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC12.84□□□□□ -0.35
Trim41Q5NCC3 CT025685.1-201ENSMUST00000213716 150 ntBASIC12.84□□□□□ -0.35
Trim41Q5NCC3 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Ehbp1-201ENSMUST00000045167 4821 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim41Q5NCC3 Gm5903-201ENSMUST00000121836 2325 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms