Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 AC153557.1-201ENSMUST00000217697 403 ntBASIC6.9□□□□□ -1.3
Shmt1P50431 Gm19340-201ENSMUST00000221995 345 ntBASIC6.9□□□□□ -1.3
Shmt1P50431 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Shmt1P50431 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Shmt1P50431 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Shmt1P50431 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC6.9□□□□□ -1.3
Shmt1P50431 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Shmt1P50431 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Shmt1P50431 Gm38277-201ENSMUST00000195172 1367 ntBASIC6.9□□□□□ -1.31
Shmt1P50431 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Shmt1P50431 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.9□□□□□ -1.31
Shmt1P50431 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Shmt1P50431 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Shmt1P50431 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC6.9□□□□□ -1.31
Shmt1P50431 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC6.9□□□□□ -1.31
Shmt1P50431 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC6.9□□□□□ -1.31
Shmt1P50431 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Shmt1P50431 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC6.9□□□□□ -1.31
Shmt1P50431 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Shmt1P50431 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Shmt1P50431 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Shmt1P50431 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Shmt1P50431 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Shmt1P50431 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Shmt1P50431 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Shmt1P50431 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Shmt1P50431 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Shmt1P50431 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Shmt1P50431 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Shmt1P50431 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6.89□□□□□ -1.31
Shmt1P50431 Gm37090-201ENSMUST00000195694 4105 ntBASIC6.89□□□□□ -1.31
Shmt1P50431 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Shmt1P50431 AC122024.1-201ENSMUST00000219276 4850 ntBASIC6.89□□□□□ -1.31
Shmt1P50431 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Shmt1P50431 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC6.89□□□□□ -1.31
Shmt1P50431 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Shmt1P50431 Gm24069-201ENSMUST00000104512 127 ntBASIC6.89□□□□□ -1.31
Shmt1P50431 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Shmt1P50431 Gm11462-201ENSMUST00000117749 562 ntBASIC6.89□□□□□ -1.31
Shmt1P50431 Klra14-ps-201ENSMUST00000119532 802 ntBASIC6.89□□□□□ -1.31
Shmt1P50431 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.89□□□□□ -1.31
Shmt1P50431 Gm15274-201ENSMUST00000131442 291 ntBASIC6.89□□□□□ -1.31
Shmt1P50431 Gm21979-201ENSMUST00000139887 291 ntBASIC6.89□□□□□ -1.31
Shmt1P50431 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
Shmt1P50431 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC6.89□□□□□ -1.31
Shmt1P50431 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC6.89□□□□□ -1.31
Shmt1P50431 Gm15259-201ENSMUST00000151262 291 ntBASIC6.89□□□□□ -1.31
Shmt1P50431 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC6.89□□□□□ -1.31
Shmt1P50431 Gm22226-201ENSMUST00000157355 109 ntBASIC6.89□□□□□ -1.31
Shmt1P50431 Gm26037-201ENSMUST00000158150 311 ntBASIC6.89□□□□□ -1.31
Shmt1P50431 Gm23164-201ENSMUST00000175084 111 ntBASIC6.89□□□□□ -1.31
Shmt1P50431 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.89□□□□□ -1.31
Shmt1P50431 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.89□□□□□ -1.31
Shmt1P50431 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC6.89□□□□□ -1.31
Shmt1P50431 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC6.89□□□□□ -1.31
Shmt1P50431 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Shmt1P50431 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Shmt1P50431 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC6.89□□□□□ -1.31
Shmt1P50431 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC6.89□□□□□ -1.31
Shmt1P50431 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Shmt1P50431 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
Shmt1P50431 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Shmt1P50431 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Shmt1P50431 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Shmt1P50431 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Shmt1P50431 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Shmt1P50431 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Shmt1P50431 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC6.89□□□□□ -1.31
Shmt1P50431 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Shmt1P50431 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Shmt1P50431 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Shmt1P50431 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Shmt1P50431 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC6.88□□□□□ -1.31
Shmt1P50431 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Shmt1P50431 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Shmt1P50431 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
Shmt1P50431 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
Shmt1P50431 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Shmt1P50431 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Shmt1P50431 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC6.88□□□□□ -1.31
Shmt1P50431 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Shmt1P50431 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Shmt1P50431 Gm43279-201ENSMUST00000202376 2512 ntBASIC6.88□□□□□ -1.31
Shmt1P50431 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Shmt1P50431 AC158537.1-201ENSMUST00000224637 1711 ntBASIC6.88□□□□□ -1.31
Shmt1P50431 AC156636.2-201ENSMUST00000218845 4557 ntBASIC6.88□□□□□ -1.31
Shmt1P50431 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Shmt1P50431 Gm7416-201ENSMUST00000117448 1487 ntBASIC6.88□□□□□ -1.31
Shmt1P50431 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Shmt1P50431 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC6.88□□□□□ -1.31
Shmt1P50431 M6pr-ps-201ENSMUST00000120481 830 ntBASIC6.88□□□□□ -1.31
Shmt1P50431 Gm15696-201ENSMUST00000121730 445 ntBASIC6.88□□□□□ -1.31
Shmt1P50431 Gm12885-201ENSMUST00000122246 328 ntBASIC6.88□□□□□ -1.31
Shmt1P50431 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Shmt1P50431 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Shmt1P50431 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Shmt1P50431 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC6.88□□□□□ -1.31
Shmt1P50431 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC6.88□□□□□ -1.31
Shmt1P50431 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC6.88□□□□□ -1.31
Shmt1P50431 Gm18833-201ENSMUST00000173218 862 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms