Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
P20040 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC5.57□□□□□ -1.52
P20040 AC154904.1-201ENSMUST00000219510 312 ntBASIC5.57□□□□□ -1.52
P20040 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
P20040 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
P20040 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
P20040 Gm9788-201ENSMUST00000057038 906 ntBASIC5.57□□□□□ -1.52
P20040 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
P20040 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
P20040 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
P20040 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.57□□□□□ -1.52
P20040 AC158605.3-201ENSMUST00000218999 2538 ntBASIC5.57□□□□□ -1.52
P20040 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
P20040 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
P20040 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
P20040 Gm14324-201ENSMUST00000121358 3051 ntBASIC5.57□□□□□ -1.52
P20040 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
P20040 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
P20040 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
P20040 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
P20040 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
P20040 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
P20040 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
P20040 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
P20040 Gm43874-201ENSMUST00000204853 2798 ntBASIC5.56□□□□□ -1.52
P20040 Gm37772-201ENSMUST00000191635 1394 ntBASIC5.56□□□□□ -1.52
P20040 Gm45838-201ENSMUST00000207355 2447 ntBASIC5.56□□□□□ -1.52
P20040 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
P20040 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
P20040 Gm43503-201ENSMUST00000200033 3408 ntBASIC5.56□□□□□ -1.52
P20040 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.56□□□□□ -1.52
P20040 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
P20040 Gm26422-201ENSMUST00000104276 132 ntBASIC5.56□□□□□ -1.52
P20040 Gm14606-201ENSMUST00000117078 1155 ntBASIC5.56□□□□□ -1.52
P20040 Gm15715-201ENSMUST00000118032 283 ntBASIC5.56□□□□□ -1.52
P20040 Gm15621-201ENSMUST00000119162 364 ntBASIC5.56□□□□□ -1.52
P20040 Gm15750-201ENSMUST00000120970 616 ntBASIC5.56□□□□□ -1.52
P20040 Gm11472-201ENSMUST00000121305 556 ntBASIC5.56□□□□□ -1.52
P20040 Gm23426-201ENSMUST00000122483 318 ntBASIC5.56□□□□□ -1.52
P20040 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
P20040 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC5.56□□□□□ -1.52
P20040 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC5.56□□□□□ -1.52
P20040 Igkv4-83-201ENSMUST00000196933 334 ntBASIC5.56□□□□□ -1.52
P20040 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC5.56□□□□□ -1.52
P20040 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
P20040 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC5.56□□□□□ -1.52
P20040 Gm45259-201ENSMUST00000209217 1006 ntBASIC5.56□□□□□ -1.52
P20040 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC5.56□□□□□ -1.52
P20040 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC5.56□□□□□ -1.52
P20040 CT030254.1-201ENSMUST00000225450 1078 ntBASIC5.56□□□□□ -1.52
P20040 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
P20040 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
P20040 Zfp865-202ENSMUST00000076791 1129 ntBASIC5.56□□□□□ -1.52
P20040 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC5.56□□□□□ -1.52
P20040 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
P20040 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
P20040 Gm18879-201ENSMUST00000221187 1537 ntBASIC5.56□□□□□ -1.52
P20040 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
P20040 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
P20040 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
P20040 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
P20040 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
P20040 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
P20040 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
P20040 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
P20040 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
P20040 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC5.56□□□□□ -1.52
P20040 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC5.56□□□□□ -1.52
P20040 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
P20040 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC5.56□□□□□ -1.52
P20040 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
P20040 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
P20040 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC5.55□□□□□ -1.52
P20040 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
P20040 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
P20040 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
P20040 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
P20040 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.55□□□□□ -1.52
P20040 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
P20040 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
P20040 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
P20040 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
P20040 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
P20040 Gm11617-201ENSMUST00000119609 639 ntBASIC5.55□□□□□ -1.52
P20040 Gm12369-201ENSMUST00000121343 942 ntBASIC5.55□□□□□ -1.52
P20040 Gm22276-201ENSMUST00000122469 129 ntBASIC5.55□□□□□ -1.52
P20040 Mir1903-201ENSMUST00000122574 80 ntBASIC5.55□□□□□ -1.52
P20040 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
P20040 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
P20040 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC5.55□□□□□ -1.52
P20040 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC5.55□□□□□ -1.52
P20040 Gm23954-201ENSMUST00000157213 353 ntBASIC5.55□□□□□ -1.52
P20040 Mir1953-201ENSMUST00000157866 89 ntBASIC5.55□□□□□ -1.52
P20040 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
P20040 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
P20040 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
P20040 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
P20040 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
P20040 Gm26509-201ENSMUST00000180947 948 ntBASIC5.55□□□□□ -1.52
P20040 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms