Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Lire1P11260 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Lire1P11260 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Lire1P11260 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
Lire1P11260 Gm25093-201ENSMUST00000103993 132 ntBASIC6.29□□□□□ -1.4
Lire1P11260 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Lire1P11260 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Lire1P11260 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Lire1P11260 Gm14267-201ENSMUST00000119751 496 ntBASIC6.29□□□□□ -1.4
Lire1P11260 Gm12920-201ENSMUST00000121818 1186 ntBASIC6.29□□□□□ -1.4
Lire1P11260 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC6.29□□□□□ -1.4
Lire1P11260 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC6.29□□□□□ -1.4
Lire1P11260 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC6.29□□□□□ -1.4
Lire1P11260 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC6.29□□□□□ -1.4
Lire1P11260 Gm22223-201ENSMUST00000157360 125 ntBASIC6.29□□□□□ -1.4
Lire1P11260 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Lire1P11260 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Lire1P11260 Gm20530-201ENSMUST00000174261 254 ntBASIC6.29□□□□□ -1.4
Lire1P11260 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC6.29□□□□□ -1.4
Lire1P11260 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Lire1P11260 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Lire1P11260 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Lire1P11260 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC6.29□□□□□ -1.4
Lire1P11260 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC6.29□□□□□ -1.4
Lire1P11260 Gm43063-201ENSMUST00000198198 1081 ntBASIC6.29□□□□□ -1.4
Lire1P11260 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Lire1P11260 Gm17834-201ENSMUST00000204322 891 ntBASIC6.29□□□□□ -1.4
Lire1P11260 Gm43905-201ENSMUST00000204516 204 ntBASIC6.29□□□□□ -1.4
Lire1P11260 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Lire1P11260 Gm8319-201ENSMUST00000205708 641 ntBASIC6.29□□□□□ -1.4
Lire1P11260 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC6.29□□□□□ -1.4
Lire1P11260 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Lire1P11260 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC6.29□□□□□ -1.4
Lire1P11260 Gm19169-201ENSMUST00000220109 1246 ntBASIC6.29□□□□□ -1.4
Lire1P11260 Gm46424-201ENSMUST00000221567 168 ntBASIC6.29□□□□□ -1.4
Lire1P11260 Gm18618-201ENSMUST00000222211 473 ntBASIC6.29□□□□□ -1.4
Lire1P11260 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC6.29□□□□□ -1.4
Lire1P11260 AC163660.4-201ENSMUST00000224983 2171 ntBASIC6.29□□□□□ -1.4
Lire1P11260 AC124395.1-201ENSMUST00000225940 707 ntBASIC6.29□□□□□ -1.4
Lire1P11260 AC154324.1-201ENSMUST00000226711 814 ntBASIC6.29□□□□□ -1.4
Lire1P11260 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Lire1P11260 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Lire1P11260 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Lire1P11260 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Lire1P11260 n-R5s97-201ENSMUST00000082585 113 ntBASIC6.29□□□□□ -1.4
Lire1P11260 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Lire1P11260 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Lire1P11260 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Lire1P11260 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Lire1P11260 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Lire1P11260 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Lire1P11260 Gm7690-201ENSMUST00000190885 1399 ntBASIC6.29□□□□□ -1.4
Lire1P11260 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Lire1P11260 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Lire1P11260 Gm37482-201ENSMUST00000194899 2791 ntBASIC6.29□□□□□ -1.4
Lire1P11260 Gm19084-201ENSMUST00000222939 1762 ntBASIC6.29□□□□□ -1.4
Lire1P11260 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Lire1P11260 AC154573.1-201ENSMUST00000225913 4659 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Lire1P11260 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Lire1P11260 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Lire1P11260 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC6.28□□□□□ -1.4
Lire1P11260 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Lire1P11260 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.28□□□□□ -1.4
Lire1P11260 AC159006.2-201ENSMUST00000228734 4144 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Lire1P11260 Gm11889-201ENSMUST00000118402 1079 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm13006-201ENSMUST00000118683 214 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm5601-201ENSMUST00000118909 972 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm14847-201ENSMUST00000121978 519 ntBASIC6.28□□□□□ -1.4
Lire1P11260 n-R5s24-201ENSMUST00000122518 117 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm22024-201ENSMUST00000122733 287 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Lire1P11260 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Lire1P11260 Gm29048-201ENSMUST00000185342 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm29403-201ENSMUST00000185491 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm28234-201ENSMUST00000185657 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm28248-201ENSMUST00000186093 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm29633-202ENSMUST00000186217 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm28829-201ENSMUST00000186231 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC6.28□□□□□ -1.4
Lire1P11260 Gm28261-201ENSMUST00000186417 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm28815-201ENSMUST00000186751 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm28608-201ENSMUST00000186860 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm29663-201ENSMUST00000186962 853 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm28122-201ENSMUST00000187088 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm28420-201ENSMUST00000187340 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm28106-201ENSMUST00000187640 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm28698-201ENSMUST00000187734 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm29224-201ENSMUST00000187965 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm29189-201ENSMUST00000188018 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Lire1P11260 Gm29476-201ENSMUST00000188397 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm29505-201ENSMUST00000188424 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm28125-201ENSMUST00000188470 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm29391-201ENSMUST00000188545 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm29280-201ENSMUST00000188571 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm28349-201ENSMUST00000188590 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm29652-201ENSMUST00000188622 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm28801-201ENSMUST00000188761 449 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms