Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
H3f3cP02301 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
H3f3cP02301 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
H3f3cP02301 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
H3f3cP02301 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.4□□□□□ -1.54
H3f3cP02301 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
H3f3cP02301 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC5.4□□□□□ -1.54
H3f3cP02301 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
H3f3cP02301 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
H3f3cP02301 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC5.4□□□□□ -1.54
H3f3cP02301 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
H3f3cP02301 Gm37474-201ENSMUST00000194812 1814 ntBASIC5.4□□□□□ -1.54
H3f3cP02301 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.54
H3f3cP02301 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
H3f3cP02301 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
H3f3cP02301 Gm22284-201ENSMUST00000104132 132 ntBASIC5.4□□□□□ -1.54
H3f3cP02301 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
H3f3cP02301 Gm7058-201ENSMUST00000119209 902 ntBASIC5.4□□□□□ -1.54
H3f3cP02301 Gm15181-201ENSMUST00000120142 177 ntBASIC5.4□□□□□ -1.54
H3f3cP02301 Sms-ps-201ENSMUST00000121773 1101 ntBASIC5.4□□□□□ -1.54
H3f3cP02301 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
H3f3cP02301 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC5.4□□□□□ -1.54
H3f3cP02301 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC5.4□□□□□ -1.54
H3f3cP02301 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC5.4□□□□□ -1.54
H3f3cP02301 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
H3f3cP02301 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
H3f3cP02301 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC5.4□□□□□ -1.54
H3f3cP02301 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC5.4□□□□□ -1.54
H3f3cP02301 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
H3f3cP02301 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
H3f3cP02301 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC5.4□□□□□ -1.54
H3f3cP02301 Gm37770-201ENSMUST00000192855 772 ntBASIC5.4□□□□□ -1.54
H3f3cP02301 AC135353.1-201ENSMUST00000215330 630 ntBASIC5.4□□□□□ -1.54
H3f3cP02301 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC5.4□□□□□ -1.54
H3f3cP02301 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC5.4□□□□□ -1.54
H3f3cP02301 Gm18628-201ENSMUST00000220584 475 ntBASIC5.4□□□□□ -1.54
H3f3cP02301 Gm9321-201ENSMUST00000221179 778 ntBASIC5.4□□□□□ -1.54
H3f3cP02301 AC211878.1-201ENSMUST00000221668 474 ntBASIC5.4□□□□□ -1.54
H3f3cP02301 AC165260.1-201ENSMUST00000224127 683 ntBASIC5.4□□□□□ -1.54
H3f3cP02301 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
H3f3cP02301 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
H3f3cP02301 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
H3f3cP02301 Gm37342-201ENSMUST00000194588 4965 ntBASIC5.4□□□□□ -1.55
H3f3cP02301 Gm45838-201ENSMUST00000207355 2447 ntBASIC5.4□□□□□ -1.55
H3f3cP02301 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
H3f3cP02301 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
H3f3cP02301 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
H3f3cP02301 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
H3f3cP02301 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
H3f3cP02301 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
H3f3cP02301 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.4□□□□□ -1.55
H3f3cP02301 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
H3f3cP02301 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
H3f3cP02301 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
H3f3cP02301 AC022775.1-201ENSMUST00000228163 2698 ntBASIC5.4□□□□□ -1.55
H3f3cP02301 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
H3f3cP02301 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3cP02301 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3cP02301 AC130831.1-201ENSMUST00000224546 1474 ntBASIC5.39□□□□□ -1.55
H3f3cP02301 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
H3f3cP02301 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3cP02301 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
H3f3cP02301 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3cP02301 Gm22231-201ENSMUST00000101027 73 ntBASIC5.39□□□□□ -1.55
H3f3cP02301 Gm22710-201ENSMUST00000116892 125 ntBASIC5.39□□□□□ -1.55
H3f3cP02301 Gm7571-201ENSMUST00000120252 927 ntBASIC5.39□□□□□ -1.55
H3f3cP02301 Gm7212-201ENSMUST00000120817 348 ntBASIC5.39□□□□□ -1.55
H3f3cP02301 Gm11882-201ENSMUST00000121463 506 ntBASIC5.39□□□□□ -1.55
H3f3cP02301 Gm8722-201ENSMUST00000121466 769 ntBASIC5.39□□□□□ -1.55
H3f3cP02301 Gm15164-201ENSMUST00000122203 271 ntBASIC5.39□□□□□ -1.55
H3f3cP02301 Gm12929-201ENSMUST00000122406 370 ntBASIC5.39□□□□□ -1.55
H3f3cP02301 Gm6081-201ENSMUST00000134472 489 ntBASIC5.39□□□□□ -1.55
H3f3cP02301 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC5.39□□□□□ -1.55
H3f3cP02301 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
H3f3cP02301 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC5.39□□□□□ -1.55
H3f3cP02301 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
H3f3cP02301 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC5.39□□□□□ -1.55
H3f3cP02301 Gm24155-201ENSMUST00000175259 110 ntBASIC5.39□□□□□ -1.55
H3f3cP02301 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
H3f3cP02301 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC5.39□□□□□ -1.55
H3f3cP02301 Gm2996-201ENSMUST00000211398 537 ntBASIC5.39□□□□□ -1.55
H3f3cP02301 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.39□□□□□ -1.55
H3f3cP02301 AC147782.1-201ENSMUST00000219169 475 ntBASIC5.39□□□□□ -1.55
H3f3cP02301 AC167222.2-201ENSMUST00000220014 295 ntBASIC5.39□□□□□ -1.55
H3f3cP02301 AC159267.1-201ENSMUST00000226702 678 ntBASIC5.39□□□□□ -1.55
H3f3cP02301 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
H3f3cP02301 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
H3f3cP02301 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
H3f3cP02301 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
H3f3cP02301 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
H3f3cP02301 Gm7155-201ENSMUST00000121143 1671 ntBASIC5.39□□□□□ -1.55
H3f3cP02301 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC5.39□□□□□ -1.55
H3f3cP02301 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3cP02301 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
H3f3cP02301 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC5.39□□□□□ -1.55
H3f3cP02301 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3cP02301 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3cP02301 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
H3f3cP02301 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
H3f3cP02301 Gm37725-201ENSMUST00000193965 2125 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 120.8 ms