Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.01□□□□□ -1.61
Hmgb3O54879 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm27675-201ENSMUST00000184527 94 ntBASIC5.01□□□□□ -1.61
Hmgb3O54879 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
Hmgb3O54879 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm26413-201ENSMUST00000196783 126 ntBASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm4525-201ENSMUST00000198831 254 ntBASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm45319-201ENSMUST00000210220 318 ntBASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm45246-201ENSMUST00000210820 367 ntBASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm6009-201ENSMUST00000210848 280 ntBASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm18863-201ENSMUST00000217004 1299 ntBASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm18940-201ENSMUST00000222518 871 ntBASIC5.01□□□□□ -1.61
Hmgb3O54879 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC5.01□□□□□ -1.61
Hmgb3O54879 AC147245.1-201ENSMUST00000223294 677 ntBASIC5.01□□□□□ -1.61
Hmgb3O54879 CT009495.1-201ENSMUST00000224221 862 ntBASIC5.01□□□□□ -1.61
Hmgb3O54879 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.01□□□□□ -1.61
Hmgb3O54879 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Hmgb3O54879 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm17199-201ENSMUST00000097296 416 ntBASIC5.01□□□□□ -1.61
Hmgb3O54879 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm7155-201ENSMUST00000121143 1671 ntBASIC5.01□□□□□ -1.61
Hmgb3O54879 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Hmgb3O54879 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.01□□□□□ -1.61
Hmgb3O54879 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm38325-201ENSMUST00000194507 1377 ntBASIC5.01□□□□□ -1.61
Hmgb3O54879 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.01□□□□□ -1.61
Hmgb3O54879 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC5.01□□□□□ -1.61
Hmgb3O54879 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm37894-201ENSMUST00000195416 2599 ntBASIC5.01□□□□□ -1.61
Hmgb3O54879 Gm7048-201ENSMUST00000199395 1891 ntBASIC5□□□□□ -1.61
Hmgb3O54879 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Hmgb3O54879 Gm37595-201ENSMUST00000192668 1742 ntBASIC5□□□□□ -1.61
Hmgb3O54879 Gm6327-201ENSMUST00000171185 1335 ntBASIC5□□□□□ -1.61
Hmgb3O54879 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Hmgb3O54879 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Hmgb3O54879 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Hmgb3O54879 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
Hmgb3O54879 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5□□□□□ -1.61
Hmgb3O54879 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Hmgb3O54879 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Hmgb3O54879 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5□□□□□ -1.61
Hmgb3O54879 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC5□□□□□ -1.61
Hmgb3O54879 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC5□□□□□ -1.61
Hmgb3O54879 Gm11653-201ENSMUST00000119992 1009 ntBASIC5□□□□□ -1.61
Hmgb3O54879 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC5□□□□□ -1.61
Hmgb3O54879 Gm27005-201ENSMUST00000182783 921 ntBASIC5□□□□□ -1.61
Hmgb3O54879 Mir6930-201ENSMUST00000183859 68 ntBASIC5□□□□□ -1.61
Hmgb3O54879 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC5□□□□□ -1.61
Hmgb3O54879 Gm8009-201ENSMUST00000191672 436 ntBASIC5□□□□□ -1.61
Hmgb3O54879 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC5□□□□□ -1.61
Hmgb3O54879 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC5□□□□□ -1.61
Hmgb3O54879 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC5□□□□□ -1.61
Hmgb3O54879 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC5□□□□□ -1.61
Hmgb3O54879 Gm43744-201ENSMUST00000196387 688 ntBASIC5□□□□□ -1.61
Hmgb3O54879 Gm42573-201ENSMUST00000202327 478 ntBASIC5□□□□□ -1.61
Hmgb3O54879 Gm31579-201ENSMUST00000203306 966 ntBASIC5□□□□□ -1.61
Hmgb3O54879 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC5□□□□□ -1.61
Hmgb3O54879 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC5□□□□□ -1.61
Hmgb3O54879 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC5□□□□□ -1.61
Hmgb3O54879 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Hmgb3O54879 Gm9321-201ENSMUST00000221179 778 ntBASIC5□□□□□ -1.61
Hmgb3O54879 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC5□□□□□ -1.61
Hmgb3O54879 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC5□□□□□ -1.61
Hmgb3O54879 Ermard-209ENSMUST00000226561 1019 ntBASIC5□□□□□ -1.61
Hmgb3O54879 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC5□□□□□ -1.61
Hmgb3O54879 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC5□□□□□ -1.61
Hmgb3O54879 Mir194-1-201ENSMUST00000083647 67 ntBASIC5□□□□□ -1.61
Hmgb3O54879 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
Hmgb3O54879 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC5□□□□□ -1.61
Hmgb3O54879 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC5□□□□□ -1.61
Hmgb3O54879 AC121997.2-201ENSMUST00000228095 2294 ntBASIC5□□□□□ -1.61
Hmgb3O54879 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Hmgb3O54879 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Hmgb3O54879 Gm43386-201ENSMUST00000199654 4001 ntBASIC5□□□□□ -1.61
Hmgb3O54879 AC159196.3-201ENSMUST00000224307 1841 ntBASIC5□□□□□ -1.61
Hmgb3O54879 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Hmgb3O54879 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Hmgb3O54879 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm37249-201ENSMUST00000195185 2869 ntBASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm37234-201ENSMUST00000193259 1441 ntBASIC4.99□□□□□ -1.61
Hmgb3O54879 AC158595.1-201ENSMUST00000217989 1435 ntBASIC4.99□□□□□ -1.61
Hmgb3O54879 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Hmgb3O54879 AC154354.1-201ENSMUST00000224585 2109 ntBASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hmgb3O54879 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hmgb3O54879 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hmgb3O54879 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hmgb3O54879 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hmgb3O54879 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Hmgb3O54879 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hmgb3O54879 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
Hmgb3O54879 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms