Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm45739-201ENSMUST00000213094 388 ntBASIC5.27□□□□□ -1.57
Col6a4A2AX52 AC154806.5-205ENSMUST00000228828 411 ntBASIC5.27□□□□□ -1.57
Col6a4A2AX52 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Col6a4A2AX52 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Col6a4A2AX52 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a4A2AX52 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC5.27□□□□□ -1.57
Col6a4A2AX52 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a4A2AX52 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a4A2AX52 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a4A2AX52 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col6a4A2AX52 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a4A2AX52 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a4A2AX52 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a4A2AX52 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC5.27□□□□□ -1.57
Col6a4A2AX52 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC5.27□□□□□ -1.57
Col6a4A2AX52 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Col6a4A2AX52 Gm15016-201ENSMUST00000117300 720 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm14220-201ENSMUST00000118114 449 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm14900-201ENSMUST00000120304 733 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm25152-201ENSMUST00000157117 114 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm15838-201ENSMUST00000161575 180 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm22420-201ENSMUST00000178795 126 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm28017-201ENSMUST00000183434 126 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm27887-201ENSMUST00000184367 102 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm27970-201ENSMUST00000184854 407 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 Mrgpra14-201ENSMUST00000189782 913 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm37376-201ENSMUST00000192176 453 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm42437-201ENSMUST00000197263 923 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 Igkv12-66-201ENSMUST00000199305 348 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 AC102287.1-201ENSMUST00000211412 454 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 CT030170.4-202ENSMUST00000221109 540 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm7768-201ENSMUST00000222988 597 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 AC140288.1-201ENSMUST00000226329 503 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 AC124709.3-201ENSMUST00000227294 171 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 AC122251.2-201ENSMUST00000227341 603 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm44045-201ENSMUST00000204906 2520 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm8855-201ENSMUST00000118888 878 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm11481-201ENSMUST00000120069 255 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm12229-201ENSMUST00000120487 468 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm15237-201ENSMUST00000122104 469 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm8321-201ENSMUST00000181691 980 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm6049-201ENSMUST00000222369 458 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm9202-201ENSMUST00000223036 437 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm10693-201ENSMUST00000144146 2037 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm38085-201ENSMUST00000195785 3062 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm34294-201ENSMUST00000191912 4263 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Col6a4A2AX52 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Gm6786-201ENSMUST00000203165 1915 ntBASIC5.26□□□□□ -1.57
Col6a4A2AX52 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Col6a4A2AX52 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm24230-201ENSMUST00000104313 129 ntBASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm12303-201ENSMUST00000119506 673 ntBASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm15331-201ENSMUST00000120225 385 ntBASIC5.25□□□□□ -1.57
Col6a4A2AX52 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC5.25□□□□□ -1.57
Col6a4A2AX52 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Col6a4A2AX52 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC5.25□□□□□ -1.57
Col6a4A2AX52 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC5.25□□□□□ -1.57
Col6a4A2AX52 Gm43148-201ENSMUST00000198237 520 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms