Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Scn3aA2ASI5 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Scn3aA2ASI5 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
Scn3aA2ASI5 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Scn3aA2ASI5 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC6.9□□□□□ -1.31
Scn3aA2ASI5 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Scn3aA2ASI5 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC6.9□□□□□ -1.31
Scn3aA2ASI5 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Scn3aA2ASI5 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Scn3aA2ASI5 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.31
Scn3aA2ASI5 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Scn3aA2ASI5 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Scn3aA2ASI5 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Scn3aA2ASI5 Gm23910-201ENSMUST00000104597 132 ntBASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm8761-201ENSMUST00000121507 955 ntBASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC6.89□□□□□ -1.31
Scn3aA2ASI5 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm22492-201ENSMUST00000157192 297 ntBASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm15970-201ENSMUST00000160623 834 ntBASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm8582-201ENSMUST00000164061 789 ntBASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm44432-201ENSMUST00000203342 938 ntBASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm18689-201ENSMUST00000203969 902 ntBASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm43946-201ENSMUST00000204058 886 ntBASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm18943-201ENSMUST00000207357 1216 ntBASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm8613-201ENSMUST00000220383 1077 ntBASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm9293-201ENSMUST00000223096 306 ntBASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm44750-201ENSMUST00000206185 2223 ntBASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm45477-201ENSMUST00000200213 5498 ntBASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm37238-201ENSMUST00000195552 2390 ntBASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm37090-201ENSMUST00000195694 4105 ntBASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm20486-201ENSMUST00000101544 128 ntBASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm4853-201ENSMUST00000119359 394 ntBASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm11198-201ENSMUST00000119771 974 ntBASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm5809-201ENSMUST00000121854 529 ntBASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm5990-201ENSMUST00000203126 746 ntBASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm45026-201ENSMUST00000205292 833 ntBASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 AC156037.1-201ENSMUST00000221133 127 ntBASIC6.89□□□□□ -1.31
Scn3aA2ASI5 AC125543.3-201ENSMUST00000221991 126 ntBASIC6.89□□□□□ -1.31
Scn3aA2ASI5 AC136376.1-201ENSMUST00000228496 950 ntBASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Scn3aA2ASI5 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC6.88□□□□□ -1.31
Scn3aA2ASI5 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Scn3aA2ASI5 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Scn3aA2ASI5 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Scn3aA2ASI5 Gm22370-201ENSMUST00000102422 83 ntBASIC6.88□□□□□ -1.31
Scn3aA2ASI5 Gm25345-201ENSMUST00000104505 133 ntBASIC6.88□□□□□ -1.31
Scn3aA2ASI5 Gm13338-201ENSMUST00000120235 361 ntBASIC6.88□□□□□ -1.31
Scn3aA2ASI5 Gm13899-201ENSMUST00000121519 1255 ntBASIC6.88□□□□□ -1.31
Scn3aA2ASI5 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Scn3aA2ASI5 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC6.88□□□□□ -1.31
Scn3aA2ASI5 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Scn3aA2ASI5 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC6.88□□□□□ -1.31
Scn3aA2ASI5 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Scn3aA2ASI5 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC6.88□□□□□ -1.31
Scn3aA2ASI5 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC6.88□□□□□ -1.31
Scn3aA2ASI5 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms