Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Gm38085-201ENSMUST00000195785 3062 ntBASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Gm38142-201ENSMUST00000194093 3555 ntBASIC6.2□□□□□ -1.42
H2afb2S4R1M3 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Gm22284-201ENSMUST00000104132 132 ntBASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Gm12939-201ENSMUST00000117303 165 ntBASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Gm15967-201ENSMUST00000120027 1116 ntBASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Gm15181-201ENSMUST00000120142 177 ntBASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Gm26162-201ENSMUST00000157793 132 ntBASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Gm20637-201ENSMUST00000175715 462 ntBASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Gm18700-201ENSMUST00000185791 553 ntBASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.2□□□□□ -1.42
H2afb2S4R1M3 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Gm37838-201ENSMUST00000194464 312 ntBASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Gm37901-201ENSMUST00000195107 514 ntBASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
H2afb2S4R1M3 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC6.2□□□□□ -1.42
H2afb2S4R1M3 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.2□□□□□ -1.42
H2afb2S4R1M3 AC163621.1-201ENSMUST00000220695 379 ntBASIC6.2□□□□□ -1.42
H2afb2S4R1M3 CT009713.1-201ENSMUST00000224828 853 ntBASIC6.2□□□□□ -1.42
H2afb2S4R1M3 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.2□□□□□ -1.42
H2afb2S4R1M3 AC154527.1-201ENSMUST00000225809 242 ntBASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Gm22300-201ENSMUST00000082661 126 ntBASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Mir194-1-201ENSMUST00000083647 67 ntBASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Gm8700-201ENSMUST00000222187 3054 ntBASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
H2afb2S4R1M3 AC130831.1-201ENSMUST00000224546 1474 ntBASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
H2afb2S4R1M3 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.2□□□□□ -1.42
H2afb2S4R1M3 Gm43502-201ENSMUST00000200263 2596 ntBASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Gm25346-201ENSMUST00000104509 128 ntBASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Gm14382-201ENSMUST00000117374 437 ntBASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Gm12400-201ENSMUST00000120915 1003 ntBASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Gm15164-201ENSMUST00000122203 271 ntBASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Mir1953-201ENSMUST00000157866 89 ntBASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Gm5283-201ENSMUST00000177874 334 ntBASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Gm17934-201ENSMUST00000192818 422 ntBASIC6.19□□□□□ -1.42
H2afb2S4R1M3 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Gm37758-201ENSMUST00000194275 629 ntBASIC6.19□□□□□ -1.42
H2afb2S4R1M3 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Gm5306-201ENSMUST00000203325 757 ntBASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Gm30646-201ENSMUST00000207662 180 ntBASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 AC148328.2-201ENSMUST00000216960 262 ntBASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Gm3785-201ENSMUST00000221000 202 ntBASIC6.19□□□□□ -1.42
H2afb2S4R1M3 AC129537.1-201ENSMUST00000226596 1228 ntBASIC6.19□□□□□ -1.42
H2afb2S4R1M3 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6.19□□□□□ -1.42
H2afb2S4R1M3 AC135086.1-201ENSMUST00000228621 817 ntBASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Glycam1-204ENSMUST00000228895 641 ntBASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
H2afb2S4R1M3 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms