Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm17222-201ENSMUST00000180135 847 ntBASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC6.11□□□□□ -1.43
Lima1Q9ERG0 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Gm7019-201ENSMUST00000194122 369 ntBASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Gm20128-201ENSMUST00000196189 417 ntBASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Gm7452-201ENSMUST00000200764 788 ntBASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Gm18586-201ENSMUST00000217265 518 ntBASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Gm9237-201ENSMUST00000221499 548 ntBASIC6.11□□□□□ -1.43
Lima1Q9ERG0 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Gm18940-201ENSMUST00000222518 871 ntBASIC6.11□□□□□ -1.43
Lima1Q9ERG0 AC154481.1-201ENSMUST00000223532 331 ntBASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Lima1Q9ERG0 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Mir194-1-201ENSMUST00000083647 67 ntBASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Lima1Q9ERG0 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Lima1Q9ERG0 AC154354.1-201ENSMUST00000224585 2109 ntBASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.11□□□□□ -1.43
Lima1Q9ERG0 AC163731.1-201ENSMUST00000225696 3118 ntBASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Gm7155-201ENSMUST00000121143 1671 ntBASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lima1Q9ERG0 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Gm37769-201ENSMUST00000193753 2369 ntBASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Gm15583-201ENSMUST00000116191 3510 ntBASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Gm14896-201ENSMUST00000121311 1351 ntBASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Gm38325-201ENSMUST00000194507 1377 ntBASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Lima1Q9ERG0 AC022775.1-201ENSMUST00000228163 2698 ntBASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Gm16073-201ENSMUST00000116032 517 ntBASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Gm15216-201ENSMUST00000118058 277 ntBASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Gm14515-201ENSMUST00000121327 216 ntBASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Gm37966-201ENSMUST00000193122 326 ntBASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Gm29784-201ENSMUST00000196217 406 ntBASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Gm21461-201ENSMUST00000200382 863 ntBASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Gm6009-201ENSMUST00000210848 280 ntBASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Gm3785-201ENSMUST00000221000 202 ntBASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Gm7557-201ENSMUST00000221935 865 ntBASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Gm9267-201ENSMUST00000222831 404 ntBASIC6.1□□□□□ -1.43
Lima1Q9ERG0 AC122937.2-201ENSMUST00000228258 1051 ntBASIC6.1□□□□□ -1.43
Lima1Q9ERG0 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Gm6436-201ENSMUST00000077163 451 ntBASIC6.1□□□□□ -1.43
Lima1Q9ERG0 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lima1Q9ERG0 AC121870.1-201ENSMUST00000216279 4879 ntBASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Lima1Q9ERG0 Gm18879-201ENSMUST00000221187 1537 ntBASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.09□□□□□ -1.43
Lima1Q9ERG0 AC159196.3-201ENSMUST00000224307 1841 ntBASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Gm44735-201ENSMUST00000206197 1752 ntBASIC6.09□□□□□ -1.43
Lima1Q9ERG0 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Gm11920-201ENSMUST00000118491 563 ntBASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Gm4234-201ENSMUST00000119747 714 ntBASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Gm8648-201ENSMUST00000122457 221 ntBASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms