Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Clrn1Q8K445 Gm24465-201ENSMUST00000178398 107 ntBASIC6.37□□□□□ -1.39
Clrn1Q8K445 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Clrn1Q8K445 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC6.37□□□□□ -1.39
Clrn1Q8K445 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC6.37□□□□□ -1.39
Clrn1Q8K445 Gm37463-201ENSMUST00000193819 796 ntBASIC6.37□□□□□ -1.39
Clrn1Q8K445 Gm6077-201ENSMUST00000196008 499 ntBASIC6.37□□□□□ -1.39
Clrn1Q8K445 Gm44342-201ENSMUST00000196874 129 ntBASIC6.37□□□□□ -1.39
Clrn1Q8K445 Gm29745-201ENSMUST00000198005 687 ntBASIC6.37□□□□□ -1.39
Clrn1Q8K445 Gm44383-201ENSMUST00000198940 129 ntBASIC6.37□□□□□ -1.39
Clrn1Q8K445 Igkv4-77-201ENSMUST00000199410 352 ntBASIC6.37□□□□□ -1.39
Clrn1Q8K445 Gm36448-201ENSMUST00000199916 438 ntBASIC6.37□□□□□ -1.39
Clrn1Q8K445 Gm43629-201ENSMUST00000201782 704 ntBASIC6.37□□□□□ -1.39
Clrn1Q8K445 Gm18215-201ENSMUST00000204429 798 ntBASIC6.37□□□□□ -1.39
Clrn1Q8K445 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC6.37□□□□□ -1.39
Clrn1Q8K445 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC6.37□□□□□ -1.39
Clrn1Q8K445 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC6.37□□□□□ -1.39
Clrn1Q8K445 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC6.37□□□□□ -1.39
Clrn1Q8K445 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Clrn1Q8K445 Gm46311-201ENSMUST00000217971 203 ntBASIC6.37□□□□□ -1.39
Clrn1Q8K445 AC155834.1-201ENSMUST00000220033 498 ntBASIC6.37□□□□□ -1.39
Clrn1Q8K445 AC155270.1-202ENSMUST00000221503 352 ntBASIC6.37□□□□□ -1.39
Clrn1Q8K445 Gm4808-201ENSMUST00000222283 1203 ntBASIC6.37□□□□□ -1.39
Clrn1Q8K445 Gm2139-201ENSMUST00000222569 1075 ntBASIC6.37□□□□□ -1.39
Clrn1Q8K445 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Clrn1Q8K445 AC140288.1-201ENSMUST00000226329 503 ntBASIC6.37□□□□□ -1.39
Clrn1Q8K445 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC6.37□□□□□ -1.39
Clrn1Q8K445 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Clrn1Q8K445 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Clrn1Q8K445 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Clrn1Q8K445 Mir135a-1-201ENSMUST00000083473 90 ntBASIC6.37□□□□□ -1.39
Clrn1Q8K445 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Clrn1Q8K445 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Clrn1Q8K445 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Clrn1Q8K445 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Clrn1Q8K445 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Clrn1Q8K445 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Clrn1Q8K445 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Clrn1Q8K445 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Clrn1Q8K445 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
Clrn1Q8K445 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clrn1Q8K445 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC6.36□□□□□ -1.39
Clrn1Q8K445 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clrn1Q8K445 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clrn1Q8K445 AC022682.2-202ENSMUST00000224394 3943 ntBASIC6.36□□□□□ -1.39
Clrn1Q8K445 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clrn1Q8K445 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clrn1Q8K445 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.36□□□□□ -1.39
Clrn1Q8K445 AC149294.7-201ENSMUST00000227475 1432 ntBASIC6.36□□□□□ -1.39
Clrn1Q8K445 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clrn1Q8K445 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clrn1Q8K445 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clrn1Q8K445 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Clrn1Q8K445 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Clrn1Q8K445 Gm14795-201ENSMUST00000118461 471 ntBASIC6.36□□□□□ -1.39
Clrn1Q8K445 Gm2199-201ENSMUST00000119065 874 ntBASIC6.36□□□□□ -1.39
Clrn1Q8K445 Gm24840-201ENSMUST00000122603 147 ntBASIC6.36□□□□□ -1.39
Clrn1Q8K445 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
Clrn1Q8K445 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.36□□□□□ -1.39
Clrn1Q8K445 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clrn1Q8K445 Gm24176-201ENSMUST00000158928 121 ntBASIC6.36□□□□□ -1.39
Clrn1Q8K445 Gm20491-201ENSMUST00000173765 1241 ntBASIC6.36□□□□□ -1.39
Clrn1Q8K445 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Clrn1Q8K445 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clrn1Q8K445 Gm27360-201ENSMUST00000183487 80 ntBASIC6.36□□□□□ -1.39
Clrn1Q8K445 Mir8105-201ENSMUST00000184718 89 ntBASIC6.36□□□□□ -1.39
Clrn1Q8K445 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clrn1Q8K445 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC6.36□□□□□ -1.39
Clrn1Q8K445 Gm17822-201ENSMUST00000204307 351 ntBASIC6.36□□□□□ -1.39
Clrn1Q8K445 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Clrn1Q8K445 Gm44705-201ENSMUST00000206719 339 ntBASIC6.36□□□□□ -1.39
Clrn1Q8K445 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC6.36□□□□□ -1.39
Clrn1Q8K445 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clrn1Q8K445 Gm46203-201ENSMUST00000218130 478 ntBASIC6.36□□□□□ -1.39
Clrn1Q8K445 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC6.36□□□□□ -1.39
Clrn1Q8K445 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clrn1Q8K445 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC6.36□□□□□ -1.39
Clrn1Q8K445 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC6.36□□□□□ -1.39
Clrn1Q8K445 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC6.36□□□□□ -1.39
Clrn1Q8K445 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC6.36□□□□□ -1.39
Clrn1Q8K445 CT485612.3-201ENSMUST00000222179 408 ntBASIC6.36□□□□□ -1.39
Clrn1Q8K445 AC150661.1-201ENSMUST00000222563 495 ntBASIC6.36□□□□□ -1.39
Clrn1Q8K445 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC6.36□□□□□ -1.39
Clrn1Q8K445 Gm7252-201ENSMUST00000223284 456 ntBASIC6.36□□□□□ -1.39
Clrn1Q8K445 AC173482.2-201ENSMUST00000224044 750 ntBASIC6.36□□□□□ -1.39
Clrn1Q8K445 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clrn1Q8K445 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clrn1Q8K445 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clrn1Q8K445 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Clrn1Q8K445 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Clrn1Q8K445 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Clrn1Q8K445 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clrn1Q8K445 Gm25587-201ENSMUST00000082498 166 ntBASIC6.36□□□□□ -1.39
Clrn1Q8K445 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clrn1Q8K445 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clrn1Q8K445 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.36□□□□□ -1.39
Clrn1Q8K445 Gm15930-201ENSMUST00000156603 2037 ntBASIC6.36□□□□□ -1.39
Clrn1Q8K445 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC6.36□□□□□ -1.39
Clrn1Q8K445 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Clrn1Q8K445 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms