Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Gm18808-201ENSMUST00000173316 462 ntBASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Gm24111-201ENSMUST00000175491 97 ntBASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Brf1Q8CFK2 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Gm18183-201ENSMUST00000191024 615 ntBASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Gm7626-201ENSMUST00000195801 353 ntBASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Gm43048-201ENSMUST00000196101 388 ntBASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Gm43354-201ENSMUST00000196862 346 ntBASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC7.63□□□□□ -1.19
Brf1Q8CFK2 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC7.63□□□□□ -1.19
Brf1Q8CFK2 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Gm19039-201ENSMUST00000204363 575 ntBASIC7.63□□□□□ -1.19
Brf1Q8CFK2 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC7.63□□□□□ -1.19
Brf1Q8CFK2 AC153557.1-201ENSMUST00000217697 403 ntBASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Gm7413-201ENSMUST00000219498 462 ntBASIC7.63□□□□□ -1.19
Brf1Q8CFK2 AC167222.2-201ENSMUST00000220014 295 ntBASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Gm7557-201ENSMUST00000221935 865 ntBASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Gm18620-201ENSMUST00000222295 324 ntBASIC7.63□□□□□ -1.19
Brf1Q8CFK2 AC105407.1-201ENSMUST00000225684 614 ntBASIC7.63□□□□□ -1.19
Brf1Q8CFK2 AC137902.1-201ENSMUST00000228184 102 ntBASIC7.63□□□□□ -1.19
Brf1Q8CFK2 AC139197.1-201ENSMUST00000228332 813 ntBASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Brf1Q8CFK2 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Gm37913-201ENSMUST00000192925 2544 ntBASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Gm44045-201ENSMUST00000204906 2520 ntBASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Brf1Q8CFK2 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC7.63□□□□□ -1.19
Brf1Q8CFK2 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Brf1Q8CFK2 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Gm42975-201ENSMUST00000200612 1491 ntBASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Gm45516-201ENSMUST00000211588 4182 ntBASIC7.62□□□□□ -1.19
Brf1Q8CFK2 AC107742.1-201ENSMUST00000227769 1390 ntBASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Gm4927-201ENSMUST00000219548 1318 ntBASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Gm26289-201ENSMUST00000104169 131 ntBASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Gm11271-201ENSMUST00000116054 440 ntBASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Gm11256-201ENSMUST00000118109 829 ntBASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Gm7058-201ENSMUST00000119209 902 ntBASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Calr-ps-201ENSMUST00000121776 485 ntBASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Gm25374-201ENSMUST00000158158 101 ntBASIC7.62□□□□□ -1.19
Brf1Q8CFK2 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Gm29778-201ENSMUST00000201667 466 ntBASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Gm44075-201ENSMUST00000204208 216 ntBASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Gm45448-201ENSMUST00000211739 209 ntBASIC7.62□□□□□ -1.19
Brf1Q8CFK2 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Gm18628-201ENSMUST00000220584 475 ntBASIC7.62□□□□□ -1.19
Brf1Q8CFK2 AC211878.1-201ENSMUST00000221668 474 ntBASIC7.62□□□□□ -1.19
Brf1Q8CFK2 AC131743.3-201ENSMUST00000222099 662 ntBASIC7.62□□□□□ -1.19
Brf1Q8CFK2 AC105950.1-201ENSMUST00000222637 408 ntBASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Gm42940-201ENSMUST00000200361 2362 ntBASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
Brf1Q8CFK2 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC7.62□□□□□ -1.19
Brf1Q8CFK2 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Brf1Q8CFK2 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 96.7 ms