Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Gm13423-201ENSMUST00000117205 888 ntBASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Gm13877-201ENSMUST00000120614 417 ntBASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Gm4887-201ENSMUST00000122230 1053 ntBASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Gm5345-201ENSMUST00000183076 1014 ntBASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Gm26413-201ENSMUST00000196783 126 ntBASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Gm4870-201ENSMUST00000198525 1251 ntBASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Gm43040-201ENSMUST00000202399 558 ntBASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 AC134333.1-201ENSMUST00000204536 944 ntBASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Gm18559-201ENSMUST00000208249 604 ntBASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Gm19056-201ENSMUST00000218220 797 ntBASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 AC167222.2-201ENSMUST00000220014 295 ntBASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Gm11360-201ENSMUST00000221898 262 ntBASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 AC154806.1-203ENSMUST00000227370 1032 ntBASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Gm37833-201ENSMUST00000194342 3256 ntBASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC6.17□□□□□ -1.42
Ccdc28bQ8CEG5 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Gm37060-201ENSMUST00000194997 2397 ntBASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Gm23834-201ENSMUST00000104436 129 ntBASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Gm14539-201ENSMUST00000117527 174 ntBASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Gm12727-201ENSMUST00000119885 359 ntBASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Gm3605-201ENSMUST00000185858 440 ntBASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Gm5334-201ENSMUST00000187472 720 ntBASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Gm28846-201ENSMUST00000189161 368 ntBASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Gm44108-201ENSMUST00000203525 422 ntBASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Gm25133-201ENSMUST00000082647 130 ntBASIC6.16□□□□□ -1.42
Ccdc28bQ8CEG5 Snora30-201ENSMUST00000083325 130 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms