Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Nup88Q8CEC0 AC115760.1-201ENSMUST00000225160 1327 ntBASIC7.43□□□□□ -1.22
Nup88Q8CEC0 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Nup88Q8CEC0 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Nup88Q8CEC0 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Nup88Q8CEC0 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC7.43□□□□□ -1.22
Nup88Q8CEC0 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
Nup88Q8CEC0 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Gm42544-201ENSMUST00000197868 3242 ntBASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Gm38377-201ENSMUST00000193253 3772 ntBASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Gm11821-201ENSMUST00000117335 979 ntBASIC7.42□□□□□ -1.22
Nup88Q8CEC0 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Gm11902-201ENSMUST00000118849 270 ntBASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Gm12307-201ENSMUST00000120581 590 ntBASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Gm13899-201ENSMUST00000121519 1255 ntBASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Rps29-ps-201ENSMUST00000122083 172 ntBASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Gm22276-201ENSMUST00000122469 129 ntBASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Gm17149-201ENSMUST00000164712 375 ntBASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Gm28527-201ENSMUST00000185210 297 ntBASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Gm18700-201ENSMUST00000185791 553 ntBASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Igkv4-73-201ENSMUST00000199760 358 ntBASIC7.42□□□□□ -1.22
Nup88Q8CEC0 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Gm45485-201ENSMUST00000211229 357 ntBASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Gm24695-201ENSMUST00000083877 83 ntBASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Gm14367-201ENSMUST00000119214 1497 ntBASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC7.42□□□□□ -1.22
Nup88Q8CEC0 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Nup88Q8CEC0 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Gm37925-201ENSMUST00000195352 4255 ntBASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Gm13338-201ENSMUST00000120235 361 ntBASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Gm13740-201ENSMUST00000120590 310 ntBASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Gm26162-201ENSMUST00000157793 132 ntBASIC7.41□□□□□ -1.22
Nup88Q8CEC0 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Gm6918-201ENSMUST00000167622 1222 ntBASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Gm20620-201ENSMUST00000177528 168 ntBASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Gm27653-201ENSMUST00000185037 136 ntBASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Gm37103-201ENSMUST00000191830 115 ntBASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC7.41□□□□□ -1.22
Nup88Q8CEC0 Gm44243-201ENSMUST00000204323 692 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms