Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm12939-201ENSMUST00000117303 165 ntBASIC6.39□□□□□ -1.39
Trub1Q8C0D0 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Gm14531-201ENSMUST00000120845 285 ntBASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Gm24682-201ENSMUST00000158764 137 ntBASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Gm6541-201ENSMUST00000165542 561 ntBASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Gm2619-202ENSMUST00000166777 651 ntBASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Gm19815-201ENSMUST00000175818 335 ntBASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Gm5947-201ENSMUST00000179156 714 ntBASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Gm5645-201ENSMUST00000179597 714 ntBASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Gm29385-201ENSMUST00000186831 363 ntBASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Gm29072-201ENSMUST00000191149 678 ntBASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Gm2614-201ENSMUST00000223227 403 ntBASIC6.39□□□□□ -1.39
Trub1Q8C0D0 AC091783.2-201ENSMUST00000224626 740 ntBASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Mir194-1-201ENSMUST00000083647 67 ntBASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trub1Q8C0D0 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Gm37925-201ENSMUST00000195352 4255 ntBASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trub1Q8C0D0 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Gm37953-201ENSMUST00000195293 1884 ntBASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Gm14510-201ENSMUST00000116165 1092 ntBASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Gm15765-201ENSMUST00000118407 910 ntBASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Gm12400-201ENSMUST00000120915 1003 ntBASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Gm13642-201ENSMUST00000121697 381 ntBASIC6.38□□□□□ -1.39
Trub1Q8C0D0 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Gm29551-201ENSMUST00000190913 698 ntBASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Ighv5-5-201ENSMUST00000193826 329 ntBASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Gm44892-201ENSMUST00000208595 488 ntBASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Gm8637-201ENSMUST00000212919 1085 ntBASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Gm9237-201ENSMUST00000221499 548 ntBASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Gm18620-201ENSMUST00000222295 324 ntBASIC6.38□□□□□ -1.39
Trub1Q8C0D0 AC113031.1-201ENSMUST00000227400 432 ntBASIC6.38□□□□□ -1.39
Trub1Q8C0D0 AC137902.1-201ENSMUST00000228184 102 ntBASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 AC158595.1-201ENSMUST00000217989 1435 ntBASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Gm43981-201ENSMUST00000203285 1467 ntBASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Gm10062-201ENSMUST00000072180 1470 ntBASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.38□□□□□ -1.39
Trub1Q8C0D0 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Gm45633-201ENSMUST00000210669 3253 ntBASIC6.37□□□□□ -1.39
Trub1Q8C0D0 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms