Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm12713-201ENSMUST00000118404 764 ntBASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Gm13207-201ENSMUST00000119862 773 ntBASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Gm5578-201ENSMUST00000121490 1236 ntBASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Gm24239-201ENSMUST00000157791 255 ntBASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Gm23071-201ENSMUST00000158242 115 ntBASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Gm20690-201ENSMUST00000177341 315 ntBASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Gm9529-201ENSMUST00000177598 579 ntBASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Gm28023-201ENSMUST00000184556 60 ntBASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Gm27825-201ENSMUST00000184586 60 ntBASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Gm8506-201ENSMUST00000186661 829 ntBASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Gm4322-201ENSMUST00000191094 336 ntBASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Ighv1-21-201ENSMUST00000194856 351 ntBASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Gm4860-201ENSMUST00000200368 454 ntBASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Gm44694-201ENSMUST00000205317 1298 ntBASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Gm6850-201ENSMUST00000210031 530 ntBASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Gm5928-201ENSMUST00000221839 466 ntBASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 AC163667.1-201ENSMUST00000225201 1289 ntBASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 AC157572.1-201ENSMUST00000227187 825 ntBASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 AC102676.1-201ENSMUST00000228131 719 ntBASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 AC131033.1-201ENSMUST00000228223 279 ntBASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC6.65□□□□□ -1.34
Ccdc40Q8BI79 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC6.65□□□□□ -1.35
Ccdc40Q8BI79 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ccdc40Q8BI79 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Ccdc40Q8BI79 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC6.65□□□□□ -1.35
Ccdc40Q8BI79 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Ccdc40Q8BI79 Gm38284-201ENSMUST00000194803 4539 ntBASIC6.65□□□□□ -1.35
Ccdc40Q8BI79 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
Ccdc40Q8BI79 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ccdc40Q8BI79 Gm42798-201ENSMUST00000200853 3972 ntBASIC6.65□□□□□ -1.35
Ccdc40Q8BI79 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Gm26422-201ENSMUST00000104276 132 ntBASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Gm15971-201ENSMUST00000119372 211 ntBASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Gm8648-201ENSMUST00000122457 221 ntBASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Gm23756-201ENSMUST00000157582 114 ntBASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Gm23762-201ENSMUST00000158348 106 ntBASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Gm22094-201ENSMUST00000158976 117 ntBASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Gm11107-201ENSMUST00000165414 505 ntBASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Gm2229-201ENSMUST00000193328 710 ntBASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Gm5324-201ENSMUST00000208115 476 ntBASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 AC132384.8-201ENSMUST00000218152 1204 ntBASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 AC116319.2-201ENSMUST00000228159 984 ntBASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC6.64□□□□□ -1.35
Ccdc40Q8BI79 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 AC122769.3-201ENSMUST00000227739 3245 ntBASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Gm14513-201ENSMUST00000117403 123 ntBASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Gm5601-201ENSMUST00000118909 972 ntBASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Gm11504-201ENSMUST00000120211 173 ntBASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Gm3810-201ENSMUST00000122413 476 ntBASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Ccdc40Q8BI79 Gm22636-201ENSMUST00000158142 275 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms