Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC7.05□□□□□ -1.28
Usp49Q6P9L4 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Gm4927-201ENSMUST00000219548 1318 ntBASIC7.04□□□□□ -1.28
Usp49Q6P9L4 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC7.04□□□□□ -1.28
Usp49Q6P9L4 AC192333.5-201ENSMUST00000224620 2350 ntBASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Gm26340-201ENSMUST00000102365 99 ntBASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Gm5133-201ENSMUST00000118940 1255 ntBASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Gm11341-201ENSMUST00000122316 447 ntBASIC7.04□□□□□ -1.28
Usp49Q6P9L4 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Gm23903-201ENSMUST00000157566 131 ntBASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Gm22428-201ENSMUST00000158554 132 ntBASIC7.04□□□□□ -1.28
Usp49Q6P9L4 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Gm28455-201ENSMUST00000189105 1290 ntBASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Gm43748-201ENSMUST00000202329 1233 ntBASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Gm44984-201ENSMUST00000207802 394 ntBASIC7.04□□□□□ -1.28
Usp49Q6P9L4 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Gm24919-201ENSMUST00000083020 106 ntBASIC7.04□□□□□ -1.28
Usp49Q6P9L4 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Usp49Q6P9L4 Gm44043-201ENSMUST00000203426 3253 ntBASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Wnk1-218ENSMUST00000161512 1426 ntBASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Gm18719-201ENSMUST00000196696 1413 ntBASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Gm43211-201ENSMUST00000196901 1899 ntBASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Gm12439-201ENSMUST00000117162 365 ntBASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Gm14294-201ENSMUST00000119749 751 ntBASIC7.03□□□□□ -1.28
Usp49Q6P9L4 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Gm23673-201ENSMUST00000157474 298 ntBASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Gm25487-201ENSMUST00000158725 125 ntBASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Mir7669-201ENSMUST00000183442 58 ntBASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Gm37177-201ENSMUST00000193768 417 ntBASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Gm37901-201ENSMUST00000195107 514 ntBASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Gm37477-201ENSMUST00000195215 884 ntBASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Usp49Q6P9L4 AC124601.1-201ENSMUST00000220531 135 ntBASIC7.03□□□□□ -1.28
Usp49Q6P9L4 AC154441.1-201ENSMUST00000223653 1006 ntBASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Usp49Q6P9L4 AC156559.2-201ENSMUST00000224403 384 ntBASIC7.03□□□□□ -1.28
Usp49Q6P9L4 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Usp49Q6P9L4 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms