Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm24153-201ENSMUST00000179280 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm25597-201ENSMUST00000179388 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Snord116l1-201ENSMUST00000179518 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm22941-201ENSMUST00000179630 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm22631-201ENSMUST00000179656 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm25816-201ENSMUST00000179764 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Snord116l12-201ENSMUST00000179816 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Snord116l14-201ENSMUST00000179875 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Snord116l8-201ENSMUST00000179889 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Snord116l7-201ENSMUST00000179895 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Snord116l5-201ENSMUST00000179927 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Snord116l6-201ENSMUST00000179955 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm26188-201ENSMUST00000179963 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm25471-201ENSMUST00000180126 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm26433-201ENSMUST00000180227 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Snord116l11-201ENSMUST00000180312 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm23862-201ENSMUST00000180342 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm22128-201ENSMUST00000180346 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Mir7084-201ENSMUST00000183876 70 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm28008-201ENSMUST00000184021 186 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm18350-201ENSMUST00000187395 955 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 AC167977.1-201ENSMUST00000221384 234 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 AC163631.1-201ENSMUST00000225041 598 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 AC167013.4-201ENSMUST00000226712 317 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm43209-201ENSMUST00000198949 1588 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm44116-201ENSMUST00000204269 1525 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 AC154257.1-201ENSMUST00000224811 1525 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim41Q5NCC3 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim41Q5NCC3 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trim41Q5NCC3 AC155298.3-201ENSMUST00000225307 3220 ntBASIC12.87□□□□□ -0.35
Trim41Q5NCC3 Cdh3-201ENSMUST00000080797 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim41Q5NCC3 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim41Q5NCC3 Olfr161-202ENSMUST00000216259 7133 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim41Q5NCC3 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim41Q5NCC3 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trim41Q5NCC3 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trim41Q5NCC3 Gm16073-201ENSMUST00000116032 517 ntBASIC12.87□□□□□ -0.35
Trim41Q5NCC3 Gm5255-201ENSMUST00000120125 642 ntBASIC12.87□□□□□ -0.35
Trim41Q5NCC3 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trim41Q5NCC3 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim41Q5NCC3 Gm2735-201ENSMUST00000136133 277 ntBASIC12.87□□□□□ -0.35
Trim41Q5NCC3 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC12.87□□□□□ -0.35
Trim41Q5NCC3 Gm22795-201ENSMUST00000157233 118 ntBASIC12.87□□□□□ -0.35
Trim41Q5NCC3 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim41Q5NCC3 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim41Q5NCC3 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC12.87□□□□□ -0.35
Trim41Q5NCC3 Gm37070-201ENSMUST00000193272 460 ntBASIC12.87□□□□□ -0.35
Trim41Q5NCC3 Gm7019-201ENSMUST00000194122 369 ntBASIC12.87□□□□□ -0.35
Trim41Q5NCC3 Gm42461-201ENSMUST00000198627 1150 ntBASIC12.87□□□□□ -0.35
Trim41Q5NCC3 Gm9375-201ENSMUST00000208899 903 ntBASIC12.87□□□□□ -0.35
Trim41Q5NCC3 AC154426.1-201ENSMUST00000225614 1132 ntBASIC12.87□□□□□ -0.35
Trim41Q5NCC3 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trim41Q5NCC3 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim41Q5NCC3 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trim41Q5NCC3 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim41Q5NCC3 Add1-205ENSMUST00000114340 3761 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Trim41Q5NCC3 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim41Q5NCC3 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim41Q5NCC3 Gm43665-201ENSMUST00000198672 1659 ntBASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Uba7-201ENSMUST00000035216 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Wdfy3-205ENSMUST00000174598 10581 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Gm14116-201ENSMUST00000117733 805 ntBASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Gm6977-201ENSMUST00000121568 512 ntBASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Snrpert-201ENSMUST00000121967 279 ntBASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Gm14847-201ENSMUST00000121978 519 ntBASIC12.86□□□□□ -0.35
Trim41Q5NCC3 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Gm28628-201ENSMUST00000187006 264 ntBASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Gm28997-201ENSMUST00000188759 429 ntBASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Gm28404-201ENSMUST00000190242 453 ntBASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Gm36928-201ENSMUST00000192466 694 ntBASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Gm37325-201ENSMUST00000194971 694 ntBASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim41Q5NCC3 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms