Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Trim43aQ3TL54 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Trim43aQ3TL54 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC6.65□□□□□ -1.34
Trim43aQ3TL54 AC160029.1-201ENSMUST00000219628 2678 ntBASIC6.65□□□□□ -1.35
Trim43aQ3TL54 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Trim43aQ3TL54 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Trim43aQ3TL54 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.35
Trim43aQ3TL54 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Trim43aQ3TL54 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Trim43aQ3TL54 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Trim43aQ3TL54 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC6.65□□□□□ -1.35
Trim43aQ3TL54 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Trim43aQ3TL54 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Trim43aQ3TL54 CT009757.4-201ENSMUST00000221520 2541 ntBASIC6.65□□□□□ -1.35
Trim43aQ3TL54 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Gm26422-201ENSMUST00000104276 132 ntBASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Gm13679-201ENSMUST00000118678 484 ntBASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Gm14741-201ENSMUST00000120777 1009 ntBASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Gm15349-201ENSMUST00000121154 204 ntBASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Gm12929-201ENSMUST00000122406 370 ntBASIC6.64□□□□□ -1.35
Trim43aQ3TL54 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Gm16298-201ENSMUST00000161107 420 ntBASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Gm7289-201ENSMUST00000168993 734 ntBASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Gm17121-201ENSMUST00000170414 847 ntBASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Gm22990-201ENSMUST00000175427 89 ntBASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Gm17222-201ENSMUST00000180135 847 ntBASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Gm27005-201ENSMUST00000182783 921 ntBASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC6.64□□□□□ -1.35
Trim43aQ3TL54 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Gm38177-201ENSMUST00000192213 1040 ntBASIC6.64□□□□□ -1.35
Trim43aQ3TL54 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC6.64□□□□□ -1.35
Trim43aQ3TL54 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Gm37637-201ENSMUST00000195540 1256 ntBASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Gm43063-201ENSMUST00000198198 1081 ntBASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Gm32158-201ENSMUST00000200135 404 ntBASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Trim43aQ3TL54 AC122371.2-201ENSMUST00000220583 366 ntBASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Gm9237-201ENSMUST00000221499 548 ntBASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trim43aQ3TL54 AC124489.3-201ENSMUST00000224037 278 ntBASIC6.64□□□□□ -1.35
Trim43aQ3TL54 AC132260.1-201ENSMUST00000225499 734 ntBASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Gm8177-201ENSMUST00000181591 1336 ntBASIC6.64□□□□□ -1.35
Trim43aQ3TL54 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Gm44735-201ENSMUST00000206197 1752 ntBASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Trim43aQ3TL54 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Gm24989-201ENSMUST00000104461 88 ntBASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Gm8855-201ENSMUST00000118888 878 ntBASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Gm11617-201ENSMUST00000119609 639 ntBASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC6.63□□□□□ -1.35
Trim43aQ3TL54 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Gm25395-201ENSMUST00000157343 272 ntBASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Gm9359-201ENSMUST00000163721 1221 ntBASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Gm27295-201ENSMUST00000184264 153 ntBASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Gm18447-201ENSMUST00000187501 307 ntBASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Gm37770-201ENSMUST00000192855 772 ntBASIC6.63□□□□□ -1.35
Trim43aQ3TL54 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Ighv8-3-201ENSMUST00000194985 295 ntBASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Gm43744-201ENSMUST00000196387 688 ntBASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Gm5853-201ENSMUST00000197183 632 ntBASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Gm17824-201ENSMUST00000197690 805 ntBASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Gm42752-201ENSMUST00000198394 1106 ntBASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Gm43867-201ENSMUST00000203860 525 ntBASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Gm18012-201ENSMUST00000204558 773 ntBASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Gm43891-201ENSMUST00000205132 3112 ntBASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Gm44856-201ENSMUST00000206639 304 ntBASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Trim43aQ3TL54 Gm45179-201ENSMUST00000208452 4337 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms