Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Mir678-201ENSMUST00000102114 84 ntBASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Gm25093-201ENSMUST00000103993 132 ntBASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Gm25724-201ENSMUST00000104531 117 ntBASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Gm12697-201ENSMUST00000118008 667 ntBASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Gm14729-201ENSMUST00000118373 689 ntBASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Gm13754-201ENSMUST00000120486 998 ntBASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Gm14613-201ENSMUST00000122239 752 ntBASIC6.43□□□□□ -1.38
Usp39Q3TIX9 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Gm22311-201ENSMUST00000158006 110 ntBASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Gm26401-201ENSMUST00000158502 76 ntBASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Mir7046-201ENSMUST00000183435 66 ntBASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Gm4856-201ENSMUST00000192696 1091 ntBASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Gm43689-201ENSMUST00000195951 427 ntBASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Gm44896-201ENSMUST00000206190 772 ntBASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC6.43□□□□□ -1.38
Usp39Q3TIX9 AC167192.4-201ENSMUST00000224087 993 ntBASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.43□□□□□ -1.38
Usp39Q3TIX9 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Gm43606-201ENSMUST00000195938 3556 ntBASIC6.43□□□□□ -1.38
Usp39Q3TIX9 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Gm43229-201ENSMUST00000201812 1850 ntBASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Usp39Q3TIX9 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Gm14865-201ENSMUST00000117523 494 ntBASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Gm11903-201ENSMUST00000118958 727 ntBASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Gm27817-201ENSMUST00000184302 233 ntBASIC6.42□□□□□ -1.38
Usp39Q3TIX9 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Gm37866-201ENSMUST00000191950 696 ntBASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Gm43048-201ENSMUST00000196101 388 ntBASIC6.42□□□□□ -1.38
Usp39Q3TIX9 AC151967.1-201ENSMUST00000198146 76 ntBASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Gm42926-201ENSMUST00000200496 697 ntBASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC6.42□□□□□ -1.38
Usp39Q3TIX9 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Gm3678-201ENSMUST00000218888 492 ntBASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 AC167977.2-201ENSMUST00000225676 682 ntBASIC6.42□□□□□ -1.38
Usp39Q3TIX9 AC132833.3-201ENSMUST00000227472 866 ntBASIC6.42□□□□□ -1.38
Usp39Q3TIX9 AC132833.4-201ENSMUST00000228313 203 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms