Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm17935-201ENSMUST00000196649 772 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm30517-201ENSMUST00000197350 772 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Amd-ps5-201ENSMUST00000198406 989 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC6.07□□□□□ -1.44
Col8a1Q00780 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col8a1Q00780 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col8a1Q00780 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm4083-201ENSMUST00000207158 451 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm45185-201ENSMUST00000207556 404 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm44946-201ENSMUST00000208425 572 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm18562-201ENSMUST00000209949 915 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm45734-201ENSMUST00000211916 411 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 AL772397.1-201ENSMUST00000216707 606 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC6.07□□□□□ -1.44
Col8a1Q00780 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC6.07□□□□□ -1.44
Col8a1Q00780 AC164294.1-201ENSMUST00000224682 688 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 CT030254.1-201ENSMUST00000225450 1078 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 CT025603.4-201ENSMUST00000225777 413 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 AC122937.1-201ENSMUST00000226405 793 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 AC131029.2-201ENSMUST00000226696 628 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 AC110380.1-201ENSMUST00000226987 389 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 AC105324.1-201ENSMUST00000227844 386 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 CT009550.2-201ENSMUST00000228851 399 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col8a1Q00780 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col8a1Q00780 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Col8a1Q00780 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Col8a1Q00780 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm10123-201ENSMUST00000075723 490 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm23423-201ENSMUST00000082782 106 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm24032-201ENSMUST00000083932 159 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Col8a1Q00780 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Col8a1Q00780 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col8a1Q00780 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col8a1Q00780 CT009757.4-201ENSMUST00000221520 2541 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col8a1Q00780 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm37403-201ENSMUST00000193775 3521 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Col8a1Q00780 AC122769.1-201ENSMUST00000226930 1714 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC6.07□□□□□ -1.44
Col8a1Q00780 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col8a1Q00780 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm37289-201ENSMUST00000195409 1402 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC6.07□□□□□ -1.44
Col8a1Q00780 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col8a1Q00780 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm5402-201ENSMUST00000119588 1618 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Col8a1Q00780 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col8a1Q00780 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col8a1Q00780 Gm20731-201ENSMUST00000193462 2288 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col8a1Q00780 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Col8a1Q00780 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col8a1Q00780 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col8a1Q00780 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col8a1Q00780 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col8a1Q00780 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Col8a1Q00780 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col8a1Q00780 n-R5s178-201ENSMUST00000104249 114 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC6.06□□□□□ -1.44
Col8a1Q00780 Gm22195-201ENSMUST00000116861 108 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 Gm13195-201ENSMUST00000117229 261 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 Gm11821-201ENSMUST00000117335 979 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 Gm13352-201ENSMUST00000117515 262 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 Gm13339-201ENSMUST00000120651 510 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 Gm13282-201ENSMUST00000121577 545 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 Gm22038-201ENSMUST00000157277 242 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 Gm23387-201ENSMUST00000158586 107 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 Gm25713-201ENSMUST00000158625 109 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 Mir1929-201ENSMUST00000158635 93 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Col8a1Q00780 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Col8a1Q00780 Gm9285-201ENSMUST00000177691 697 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col8a1Q00780 Gm9423-201ENSMUST00000183173 997 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 Vis1-201ENSMUST00000183957 201 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 Gm27653-201ENSMUST00000185037 136 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 Gm2617-201ENSMUST00000185690 1066 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC6.06□□□□□ -1.44
Col8a1Q00780 Gm28661-201ENSMUST00000188231 681 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 Gm28801-201ENSMUST00000188761 449 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC6.06□□□□□ -1.44
Col8a1Q00780 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col8a1Q00780 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC6.06□□□□□ -1.44
Col8a1Q00780 Gm36965-201ENSMUST00000193797 394 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC6.06□□□□□ -1.44
Col8a1Q00780 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC6.06□□□□□ -1.44
Col8a1Q00780 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms