Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC9.54□□□□□ -0.88
Cux1P53564 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Cux1P53564 AC110381.1-201ENSMUST00000218987 586 ntBASIC9.54□□□□□ -0.88
Cux1P53564 Gm18628-201ENSMUST00000220584 475 ntBASIC9.54□□□□□ -0.88
Cux1P53564 AC211878.1-201ENSMUST00000221668 474 ntBASIC9.54□□□□□ -0.88
Cux1P53564 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Cux1P53564 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cux1P53564 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cux1P53564 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cux1P53564 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cux1P53564 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cux1P53564 Gm11516-201ENSMUST00000118450 1582 ntBASIC9.54□□□□□ -0.88
Cux1P53564 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cux1P53564 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cux1P53564 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cux1P53564 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cux1P53564 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cux1P53564 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cux1P53564 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cux1P53564 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cux1P53564 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cux1P53564 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cux1P53564 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC9.53□□□□□ -0.88
Cux1P53564 Gm17142-201ENSMUST00000164933 645 ntBASIC9.53□□□□□ -0.88
Cux1P53564 Gm23164-201ENSMUST00000175084 111 ntBASIC9.53□□□□□ -0.88
Cux1P53564 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC9.53□□□□□ -0.88
Cux1P53564 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Cux1P53564 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Cux1P53564 Gm38181-201ENSMUST00000181357 720 ntBASIC9.53□□□□□ -0.88
Cux1P53564 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC9.53□□□□□ -0.88
Cux1P53564 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC9.53□□□□□ -0.88
Cux1P53564 Gm44219-201ENSMUST00000203005 273 ntBASIC9.53□□□□□ -0.88
Cux1P53564 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC9.53□□□□□ -0.88
Cux1P53564 AC158525.1-201ENSMUST00000223806 576 ntBASIC9.53□□□□□ -0.88
Cux1P53564 n-R5s180-201ENSMUST00000082770 106 ntBASIC9.53□□□□□ -0.88
Cux1P53564 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cux1P53564 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Cux1P53564 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cux1P53564 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Cux1P53564 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Cux1P53564 Gm43062-201ENSMUST00000196302 1319 ntBASIC9.53□□□□□ -0.88
Cux1P53564 Gm9930-201ENSMUST00000066742 3151 ntBASIC9.53□□□□□ -0.88
Cux1P53564 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
Cux1P53564 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Cux1P53564 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Cux1P53564 Gm22592-201ENSMUST00000104242 131 ntBASIC9.52□□□□□ -0.88
Cux1P53564 Gm16423-201ENSMUST00000120078 947 ntBASIC9.52□□□□□ -0.88
Cux1P53564 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC9.52□□□□□ -0.88
Cux1P53564 Gm25824-201ENSMUST00000157092 121 ntBASIC9.52□□□□□ -0.88
Cux1P53564 Gm25152-201ENSMUST00000157117 114 ntBASIC9.52□□□□□ -0.88
Cux1P53564 Gm22867-201ENSMUST00000157499 109 ntBASIC9.52□□□□□ -0.88
Cux1P53564 Gm5430-201ENSMUST00000182525 915 ntBASIC9.52□□□□□ -0.88
Cux1P53564 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC9.52□□□□□ -0.88
Cux1P53564 Gm37358-201ENSMUST00000195492 479 ntBASIC9.52□□□□□ -0.88
Cux1P53564 Gm45596-201ENSMUST00000209279 434 ntBASIC9.52□□□□□ -0.88
Cux1P53564 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC9.52□□□□□ -0.88
Cux1P53564 AC159208.1-201ENSMUST00000221403 649 ntBASIC9.52□□□□□ -0.88
Cux1P53564 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cux1P53564 Gm42940-201ENSMUST00000200361 2362 ntBASIC9.52□□□□□ -0.89
Cux1P53564 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cux1P53564 Gm9877-201ENSMUST00000064271 2627 ntBASIC9.52□□□□□ -0.89
Cux1P53564 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cux1P53564 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cux1P53564 AL670757.1-201ENSMUST00000223668 1959 ntBASIC9.52□□□□□ -0.89
Cux1P53564 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Cux1P53564 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cux1P53564 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC9.51□□□□□ -0.89
Cux1P53564 Gm14755-201ENSMUST00000118037 384 ntBASIC9.51□□□□□ -0.89
Cux1P53564 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cux1P53564 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC9.51□□□□□ -0.89
Cux1P53564 Gm4764-201ENSMUST00000130207 1233 ntBASIC9.51□□□□□ -0.89
Cux1P53564 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC9.51□□□□□ -0.89
Cux1P53564 Gm27409-201ENSMUST00000184727 80 ntBASIC9.51□□□□□ -0.89
Cux1P53564 Gm3605-201ENSMUST00000185858 440 ntBASIC9.51□□□□□ -0.89
Cux1P53564 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Cux1P53564 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC9.51□□□□□ -0.89
Cux1P53564 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC9.51□□□□□ -0.89
Cux1P53564 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cux1P53564 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cux1P53564 Mir484-201ENSMUST00000093566 67 ntBASIC9.51□□□□□ -0.89
Cux1P53564 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Cux1P53564 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cux1P53564 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cux1P53564 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cux1P53564 Gm37686-201ENSMUST00000194099 2309 ntBASIC9.51□□□□□ -0.89
Cux1P53564 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cux1P53564 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC9.51□□□□□ -0.89
Cux1P53564 Gm19093-201ENSMUST00000210671 1454 ntBASIC9.51□□□□□ -0.89
Cux1P53564 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cux1P53564 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cux1P53564 Gm37274-201ENSMUST00000192167 1682 ntBASIC9.51□□□□□ -0.89
Cux1P53564 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Cux1P53564 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Cux1P53564 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Cux1P53564 Gm24230-201ENSMUST00000104313 129 ntBASIC9.51□□□□□ -0.89
Cux1P53564 Gm22710-201ENSMUST00000116892 125 ntBASIC9.51□□□□□ -0.89
Cux1P53564 Gm11481-201ENSMUST00000120069 255 ntBASIC9.51□□□□□ -0.89
Cux1P53564 Gm13493-201ENSMUST00000120318 493 ntBASIC9.51□□□□□ -0.89
Cux1P53564 Gm11787-201ENSMUST00000121996 1050 ntBASIC9.51□□□□□ -0.89
Cux1P53564 Gm22959-201ENSMUST00000122514 303 ntBASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms