Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sox6P40645 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox6P40645 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox6P40645 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
Sox6P40645 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox6P40645 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox6P40645 Gm44193-201ENSMUST00000204822 2523 ntBASIC5.89□□□□□ -1.47
Sox6P40645 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC5.89□□□□□ -1.47
Sox6P40645 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox6P40645 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Sox6P40645 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Sox6P40645 Gm37755-201ENSMUST00000195880 2179 ntBASIC5.89□□□□□ -1.47
Sox6P40645 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Sox6P40645 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sox6P40645 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox6P40645 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox6P40645 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox6P40645 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox6P40645 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
Sox6P40645 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox6P40645 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Sox6P40645 Gm12677-201ENSMUST00000118668 426 ntBASIC5.89□□□□□ -1.47
Sox6P40645 Gm14300-201ENSMUST00000120800 946 ntBASIC5.89□□□□□ -1.47
Sox6P40645 Gm5843-201ENSMUST00000121631 476 ntBASIC5.89□□□□□ -1.47
Sox6P40645 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC5.89□□□□□ -1.47
Sox6P40645 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC5.89□□□□□ -1.47
Sox6P40645 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sox6P40645 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC5.89□□□□□ -1.47
Sox6P40645 Gm22820-201ENSMUST00000157205 329 ntBASIC5.89□□□□□ -1.47
Sox6P40645 Gm25550-201ENSMUST00000158079 128 ntBASIC5.89□□□□□ -1.47
Sox6P40645 Gm3140-201ENSMUST00000163523 481 ntBASIC5.89□□□□□ -1.47
Sox6P40645 Gm9064-201ENSMUST00000163579 566 ntBASIC5.89□□□□□ -1.47
Sox6P40645 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC5.89□□□□□ -1.47
Sox6P40645 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sox6P40645 Gm20432-201ENSMUST00000173716 250 ntBASIC5.89□□□□□ -1.47
Sox6P40645 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Sox6P40645 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Sox6P40645 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC5.89□□□□□ -1.47
Sox6P40645 Mir6348-201ENSMUST00000183804 120 ntBASIC5.89□□□□□ -1.47
Sox6P40645 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC5.89□□□□□ -1.47
Sox6P40645 Gm9504-201ENSMUST00000196322 468 ntBASIC5.89□□□□□ -1.47
Sox6P40645 Igkv4-83-201ENSMUST00000196933 334 ntBASIC5.89□□□□□ -1.47
Sox6P40645 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC5.89□□□□□ -1.47
Sox6P40645 Gm43867-201ENSMUST00000203860 525 ntBASIC5.89□□□□□ -1.47
Sox6P40645 Gm30646-201ENSMUST00000207662 180 ntBASIC5.89□□□□□ -1.47
Sox6P40645 Gm45343-201ENSMUST00000210452 828 ntBASIC5.89□□□□□ -1.47
Sox6P40645 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Sox6P40645 Gm8607-201ENSMUST00000221864 431 ntBASIC5.89□□□□□ -1.47
Sox6P40645 Gm9293-201ENSMUST00000223096 306 ntBASIC5.89□□□□□ -1.47
Sox6P40645 AC154573.2-201ENSMUST00000224174 378 ntBASIC5.89□□□□□ -1.47
Sox6P40645 AC107663.1-201ENSMUST00000224257 468 ntBASIC5.89□□□□□ -1.47
Sox6P40645 AC154640.3-201ENSMUST00000227492 846 ntBASIC5.89□□□□□ -1.47
Sox6P40645 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox6P40645 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox6P40645 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Sox6P40645 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Sox6P40645 n-R5s217-201ENSMUST00000083341 116 ntBASIC5.89□□□□□ -1.47
Sox6P40645 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Sox6P40645 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
Sox6P40645 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
Sox6P40645 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sox6P40645 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox6P40645 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Sox6P40645 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox6P40645 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sox6P40645 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.89□□□□□ -1.47
Sox6P40645 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Sox6P40645 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC5.89□□□□□ -1.47
Sox6P40645 Gm37100-201ENSMUST00000193344 1353 ntBASIC5.89□□□□□ -1.47
Sox6P40645 Gm44229-201ENSMUST00000203211 2487 ntBASIC5.89□□□□□ -1.47
Sox6P40645 CT009757.4-201ENSMUST00000221520 2541 ntBASIC5.89□□□□□ -1.47
Sox6P40645 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC5.89□□□□□ -1.47
Sox6P40645 Gm10826-201ENSMUST00000215366 3304 ntBASIC5.89□□□□□ -1.47
Sox6P40645 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
Sox6P40645 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox6P40645 Gm4994-201ENSMUST00000118379 2187 ntBASIC5.89□□□□□ -1.47
Sox6P40645 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox6P40645 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox6P40645 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Sox6P40645 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC5.88□□□□□ -1.47
Sox6P40645 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC5.88□□□□□ -1.47
Sox6P40645 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.88□□□□□ -1.47
Sox6P40645 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.88□□□□□ -1.47
Sox6P40645 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sox6P40645 M6pr-ps-201ENSMUST00000120481 830 ntBASIC5.88□□□□□ -1.47
Sox6P40645 Gm14038-201ENSMUST00000121500 807 ntBASIC5.88□□□□□ -1.47
Sox6P40645 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC5.88□□□□□ -1.47
Sox6P40645 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sox6P40645 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sox6P40645 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sox6P40645 Gm6264-201ENSMUST00000160802 624 ntBASIC5.88□□□□□ -1.47
Sox6P40645 Gm8550-201ENSMUST00000161621 653 ntBASIC5.88□□□□□ -1.47
Sox6P40645 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Sox6P40645 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sox6P40645 Gm20637-201ENSMUST00000175715 462 ntBASIC5.88□□□□□ -1.47
Sox6P40645 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox6P40645 Gm27186-201ENSMUST00000184223 307 ntBASIC5.88□□□□□ -1.47
Sox6P40645 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC5.88□□□□□ -1.47
Sox6P40645 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC5.88□□□□□ -1.47
Sox6P40645 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms