Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm10936-201ENSMUST00000105264 252 ntBASIC7.43□□□□□ -1.22
Traf1P39428 Gm22103-201ENSMUST00000116733 121 ntBASIC7.43□□□□□ -1.22
Traf1P39428 Gm26475-201ENSMUST00000116769 121 ntBASIC7.43□□□□□ -1.22
Traf1P39428 Gm23620-201ENSMUST00000116812 121 ntBASIC7.43□□□□□ -1.22
Traf1P39428 Gm25042-201ENSMUST00000116856 121 ntBASIC7.43□□□□□ -1.22
Traf1P39428 Gm25540-201ENSMUST00000116880 121 ntBASIC7.43□□□□□ -1.22
Traf1P39428 Gm12262-201ENSMUST00000119915 305 ntBASIC7.43□□□□□ -1.22
Traf1P39428 Gm15967-201ENSMUST00000120027 1116 ntBASIC7.43□□□□□ -1.22
Traf1P39428 Gm12229-201ENSMUST00000120487 468 ntBASIC7.43□□□□□ -1.22
Traf1P39428 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Traf1P39428 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Traf1P39428 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Traf1P39428 Gm9529-201ENSMUST00000177598 579 ntBASIC7.43□□□□□ -1.22
Traf1P39428 Gm23550-201ENSMUST00000179003 121 ntBASIC7.43□□□□□ -1.22
Traf1P39428 Gm25123-201ENSMUST00000179154 121 ntBASIC7.43□□□□□ -1.22
Traf1P39428 Gm25353-201ENSMUST00000179366 121 ntBASIC7.43□□□□□ -1.22
Traf1P39428 Gm22992-201ENSMUST00000179496 121 ntBASIC7.43□□□□□ -1.22
Traf1P39428 Gm25892-201ENSMUST00000179867 121 ntBASIC7.43□□□□□ -1.22
Traf1P39428 Gm24092-201ENSMUST00000180257 121 ntBASIC7.43□□□□□ -1.22
Traf1P39428 Gm8919-201ENSMUST00000182028 1014 ntBASIC7.43□□□□□ -1.22
Traf1P39428 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Traf1P39428 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC7.43□□□□□ -1.22
Traf1P39428 Gm43233-201ENSMUST00000200491 616 ntBASIC7.43□□□□□ -1.22
Traf1P39428 Gm4083-201ENSMUST00000207158 451 ntBASIC7.43□□□□□ -1.22
Traf1P39428 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC7.43□□□□□ -1.22
Traf1P39428 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC7.43□□□□□ -1.22
Traf1P39428 AC154718.1-201ENSMUST00000226676 250 ntBASIC7.43□□□□□ -1.22
Traf1P39428 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Traf1P39428 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC7.43□□□□□ -1.22
Traf1P39428 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Traf1P39428 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Traf1P39428 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Traf1P39428 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Traf1P39428 Gm43360-201ENSMUST00000197656 2887 ntBASIC7.43□□□□□ -1.22
Traf1P39428 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Traf1P39428 Gm43502-201ENSMUST00000200263 2596 ntBASIC7.43□□□□□ -1.22
Traf1P39428 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Traf1P39428 Gm42541-201ENSMUST00000199871 2249 ntBASIC7.43□□□□□ -1.22
Traf1P39428 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Traf1P39428 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Traf1P39428 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
Traf1P39428 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Traf1P39428 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Traf1P39428 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
Traf1P39428 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Traf1P39428 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Traf1P39428 Gm43682-201ENSMUST00000202150 2090 ntBASIC7.42□□□□□ -1.22
Traf1P39428 Gm18310-201ENSMUST00000206494 3912 ntBASIC7.42□□□□□ -1.22
Traf1P39428 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Traf1P39428 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Traf1P39428 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Traf1P39428 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Traf1P39428 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Traf1P39428 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Traf1P39428 Dennd6a-204ENSMUST00000224248 2775 ntBASIC7.42□□□□□ -1.22
Traf1P39428 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Traf1P39428 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Traf1P39428 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Traf1P39428 Gm22374-201ENSMUST00000104583 132 ntBASIC7.42□□□□□ -1.22
Traf1P39428 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC7.42□□□□□ -1.22
Traf1P39428 Gm15016-201ENSMUST00000117300 720 ntBASIC7.42□□□□□ -1.22
Traf1P39428 Gm14054-201ENSMUST00000120744 704 ntBASIC7.42□□□□□ -1.22
Traf1P39428 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC7.42□□□□□ -1.22
Traf1P39428 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
Traf1P39428 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Traf1P39428 Gm25057-201ENSMUST00000157366 88 ntBASIC7.42□□□□□ -1.22
Traf1P39428 Gm26381-201ENSMUST00000174895 92 ntBASIC7.42□□□□□ -1.22
Traf1P39428 Gm22548-201ENSMUST00000174899 78 ntBASIC7.42□□□□□ -1.22
Traf1P39428 Gm37475-201ENSMUST00000193107 1015 ntBASIC7.42□□□□□ -1.22
Traf1P39428 Gm43390-201ENSMUST00000196614 421 ntBASIC7.42□□□□□ -1.22
Traf1P39428 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC7.42□□□□□ -1.22
Traf1P39428 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Traf1P39428 Gm19212-201ENSMUST00000216642 862 ntBASIC7.42□□□□□ -1.22
Traf1P39428 AC122251.2-201ENSMUST00000227341 603 ntBASIC7.42□□□□□ -1.22
Traf1P39428 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Traf1P39428 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Traf1P39428 Gm15500-201ENSMUST00000071523 894 ntBASIC7.42□□□□□ -1.22
Traf1P39428 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Traf1P39428 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Traf1P39428 n-R5s56-201ENSMUST00000082521 105 ntBASIC7.42□□□□□ -1.22
Traf1P39428 Gm24405-201ENSMUST00000083033 167 ntBASIC7.42□□□□□ -1.22
Traf1P39428 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Traf1P39428 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC7.42□□□□□ -1.22
Traf1P39428 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Traf1P39428 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Traf1P39428 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Traf1P39428 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
Traf1P39428 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Traf1P39428 AC140393.3-201ENSMUST00000228396 1352 ntBASIC7.42□□□□□ -1.22
Traf1P39428 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Traf1P39428 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Traf1P39428 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Traf1P39428 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC7.42□□□□□ -1.22
Traf1P39428 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
Traf1P39428 Gm43176-201ENSMUST00000199653 2989 ntBASIC7.41□□□□□ -1.22
Traf1P39428 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
Traf1P39428 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Traf1P39428 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Traf1P39428 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Traf1P39428 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 109.5 ms