Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Gm28023-201ENSMUST00000184556 60 ntBASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gm27825-201ENSMUST00000184586 60 ntBASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gm18849-201ENSMUST00000189861 560 ntBASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gm5853-201ENSMUST00000197183 632 ntBASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 AC122327.2-201ENSMUST00000220883 120 ntBASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gm9321-201ENSMUST00000221179 778 ntBASIC5.27□□□□□ -1.57
Usf3B2RUQ2 AC122327.3-201ENSMUST00000221852 120 ntBASIC5.27□□□□□ -1.57
Usf3B2RUQ2 AC166341.1-201ENSMUST00000223360 105 ntBASIC5.27□□□□□ -1.57
Usf3B2RUQ2 AC122290.1-201ENSMUST00000225631 1078 ntBASIC5.27□□□□□ -1.57
Usf3B2RUQ2 CT025667.1-201ENSMUST00000225872 382 ntBASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gm43502-201ENSMUST00000200263 2596 ntBASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gm44436-201ENSMUST00000204200 1494 ntBASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
Usf3B2RUQ2 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm37943-201ENSMUST00000194053 3944 ntBASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 AC116950.1-201ENSMUST00000226322 3250 ntBASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm22371-201ENSMUST00000104588 130 ntBASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm6977-201ENSMUST00000121568 512 ntBASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm12618-201ENSMUST00000121754 483 ntBASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm2325-201ENSMUST00000186637 581 ntBASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm6137-201ENSMUST00000187552 578 ntBASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm21728-201ENSMUST00000188442 695 ntBASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm21889-201ENSMUST00000188487 695 ntBASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm20932-201ENSMUST00000189115 694 ntBASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm21920-201ENSMUST00000190042 695 ntBASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm37609-201ENSMUST00000191778 678 ntBASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm37735-201ENSMUST00000193995 1406 ntBASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Gm4510-201ENSMUST00000218265 427 ntBASIC5.26□□□□□ -1.57
Usf3B2RUQ2 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 AC170086.2-201ENSMUST00000224733 803 ntBASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Mir134-201ENSMUST00000083492 71 ntBASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usf3B2RUQ2 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms