Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Gm25564-201ENSMUST00000104604 132 ntBASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Gm14098-201ENSMUST00000119295 623 ntBASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Gm11370-201ENSMUST00000120583 260 ntBASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Gm12399-201ENSMUST00000121475 446 ntBASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Gm12504-202ENSMUST00000148026 306 ntBASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Gm25904-201ENSMUST00000158491 143 ntBASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Ighv1-45-201ENSMUST00000193677 352 ntBASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Gm19653-201ENSMUST00000204326 1039 ntBASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Gm5027-201ENSMUST00000206700 375 ntBASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Gm7351-201ENSMUST00000210745 580 ntBASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC6.22□□□□□ -1.41
H2afb2S4R1M3 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
H2afb2S4R1M3 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
H2afb2S4R1M3 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
H2afb2S4R1M3 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
H2afb2S4R1M3 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
H2afb2S4R1M3 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
H2afb2S4R1M3 Gm4073-201ENSMUST00000176792 3500 ntBASIC6.21□□□□□ -1.41
H2afb2S4R1M3 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.41
H2afb2S4R1M3 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
H2afb2S4R1M3 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
H2afb2S4R1M3 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Gm20789-201ENSMUST00000221002 4195 ntBASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Gm13854-201ENSMUST00000121183 1679 ntBASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Gm11472-201ENSMUST00000121305 556 ntBASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Gm12929-201ENSMUST00000122406 370 ntBASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Gm20549-201ENSMUST00000174804 429 ntBASIC6.21□□□□□ -1.42
H2afb2S4R1M3 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Mir7685-201ENSMUST00000183555 62 ntBASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Gm32158-201ENSMUST00000200135 404 ntBASIC6.21□□□□□ -1.42
H2afb2S4R1M3 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Gm17834-201ENSMUST00000204322 891 ntBASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Gm45127-201ENSMUST00000205984 1015 ntBASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Gm6070-201ENSMUST00000207275 419 ntBASIC6.21□□□□□ -1.42
H2afb2S4R1M3 AC147782.1-201ENSMUST00000219169 475 ntBASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
H2afb2S4R1M3 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms