Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC7.15□□□□□ -1.26
Smc1aQ9CU62 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC7.15□□□□□ -1.26
Smc1aQ9CU62 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC7.15□□□□□ -1.26
Smc1aQ9CU62 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC7.15□□□□□ -1.26
Smc1aQ9CU62 AC126685.1-201ENSMUST00000221001 121 ntBASIC7.15□□□□□ -1.26
Smc1aQ9CU62 Gm19340-201ENSMUST00000221995 345 ntBASIC7.15□□□□□ -1.26
Smc1aQ9CU62 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC7.15□□□□□ -1.26
Smc1aQ9CU62 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Smc1aQ9CU62 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Smc1aQ9CU62 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Smc1aQ9CU62 Gm25133-201ENSMUST00000082647 130 ntBASIC7.15□□□□□ -1.26
Smc1aQ9CU62 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Smc1aQ9CU62 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Smc1aQ9CU62 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Smc1aQ9CU62 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Smc1aQ9CU62 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC7.15□□□□□ -1.27
Smc1aQ9CU62 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Smc1aQ9CU62 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Smc1aQ9CU62 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.27
Smc1aQ9CU62 Gm37755-201ENSMUST00000195880 2179 ntBASIC7.15□□□□□ -1.27
Smc1aQ9CU62 Gm43410-201ENSMUST00000197510 2234 ntBASIC7.15□□□□□ -1.27
Smc1aQ9CU62 AC129308.2-203ENSMUST00000224109 2385 ntBASIC7.15□□□□□ -1.27
Smc1aQ9CU62 AC121960.2-201ENSMUST00000227349 3446 ntBASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Gm13772-201ENSMUST00000118431 317 ntBASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Gm15750-201ENSMUST00000120970 616 ntBASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Gm13854-201ENSMUST00000121183 1679 ntBASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Gm12094-201ENSMUST00000121781 472 ntBASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Gm8648-201ENSMUST00000122457 221 ntBASIC7.14□□□□□ -1.27
Smc1aQ9CU62 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Gm25675-201ENSMUST00000174979 118 ntBASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Gm27348-201ENSMUST00000184511 170 ntBASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Gm44571-201ENSMUST00000208092 533 ntBASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Gm32983-201ENSMUST00000208500 505 ntBASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Gm45899-201ENSMUST00000212196 1276 ntBASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Gm7769-201ENSMUST00000212900 933 ntBASIC7.14□□□□□ -1.27
Smc1aQ9CU62 AL929555.1-201ENSMUST00000215283 509 ntBASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC7.14□□□□□ -1.27
Smc1aQ9CU62 AL669819.1-201ENSMUST00000225143 330 ntBASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Xpo7-203ENSMUST00000226448 3663 ntBASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Gm43864-201ENSMUST00000204452 4028 ntBASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Smc1aQ9CU62 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC7.13□□□□□ -1.27
Smc1aQ9CU62 AC162936.1-201ENSMUST00000223676 2368 ntBASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Smc1aQ9CU62 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Gm44676-201ENSMUST00000208520 3055 ntBASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Gm24709-201ENSMUST00000104123 132 ntBASIC7.13□□□□□ -1.27
Smc1aQ9CU62 n-R5s178-201ENSMUST00000104249 114 ntBASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Gm26146-201ENSMUST00000104478 185 ntBASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Gm13566-201ENSMUST00000117428 1142 ntBASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Gm14580-201ENSMUST00000119122 718 ntBASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Gm15149-201ENSMUST00000119370 360 ntBASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Gm14614-201ENSMUST00000119873 384 ntBASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Gm15181-201ENSMUST00000120142 177 ntBASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Gm14925-201ENSMUST00000120611 438 ntBASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Gm15618-201ENSMUST00000121610 452 ntBASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Gm24435-201ENSMUST00000157886 110 ntBASIC7.13□□□□□ -1.27
Smc1aQ9CU62 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Gm22690-201ENSMUST00000175054 110 ntBASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Mir7072-201ENSMUST00000184542 60 ntBASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Gm28620-201ENSMUST00000190463 439 ntBASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Gm5694-201ENSMUST00000195648 641 ntBASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Gm7663-201ENSMUST00000201151 1240 ntBASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Gm2602-201ENSMUST00000202112 571 ntBASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Smc1aQ9CU62 Gm44163-201ENSMUST00000205140 475 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms