Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Mir697-201ENSMUST00000102316 109 ntBASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm7129-201ENSMUST00000117402 997 ntBASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm15040-201ENSMUST00000118561 1241 ntBASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm25807-201ENSMUST00000122783 305 ntBASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm22793-201ENSMUST00000157227 330 ntBASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm25713-201ENSMUST00000158625 109 ntBASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm23164-201ENSMUST00000175084 111 ntBASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm24754-201ENSMUST00000177997 107 ntBASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm8192-201ENSMUST00000182196 958 ntBASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm27019-201ENSMUST00000183056 404 ntBASIC7.99□□□□□ -1.13
Trim11Q99PQ2 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm28740-201ENSMUST00000186142 215 ntBASIC7.99□□□□□ -1.13
Trim11Q99PQ2 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm17833-201ENSMUST00000197629 1065 ntBASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm8035-201ENSMUST00000204625 687 ntBASIC7.99□□□□□ -1.13
Trim11Q99PQ2 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 AC187103.4-201ENSMUST00000225399 300 ntBASIC7.99□□□□□ -1.13
Trim11Q99PQ2 AC152940.1-201ENSMUST00000226504 139 ntBASIC7.99□□□□□ -1.13
Trim11Q99PQ2 AC138765.3-201ENSMUST00000227981 423 ntBASIC7.99□□□□□ -1.13
Trim11Q99PQ2 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm6054-201ENSMUST00000078052 378 ntBASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Trim11Q99PQ2 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim11Q99PQ2 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim11Q99PQ2 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim11Q99PQ2 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim11Q99PQ2 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim11Q99PQ2 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim11Q99PQ2 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim11Q99PQ2 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim11Q99PQ2 Gm37525-201ENSMUST00000193499 2871 ntBASIC7.98□□□□□ -1.13
Trim11Q99PQ2 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim11Q99PQ2 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim11Q99PQ2 Gm14415-201ENSMUST00000118260 1578 ntBASIC7.98□□□□□ -1.13
Trim11Q99PQ2 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
Trim11Q99PQ2 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC7.98□□□□□ -1.13
Trim11Q99PQ2 Gm14786-201ENSMUST00000117127 944 ntBASIC7.98□□□□□ -1.13
Trim11Q99PQ2 Gm14279-201ENSMUST00000117142 332 ntBASIC7.98□□□□□ -1.13
Trim11Q99PQ2 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC7.98□□□□□ -1.13
Trim11Q99PQ2 Gm10243-201ENSMUST00000117571 333 ntBASIC7.98□□□□□ -1.13
Trim11Q99PQ2 Gm2003-201ENSMUST00000118537 636 ntBASIC7.98□□□□□ -1.13
Trim11Q99PQ2 Gm11318-201ENSMUST00000118640 961 ntBASIC7.98□□□□□ -1.13
Trim11Q99PQ2 Gm15616-201ENSMUST00000118662 375 ntBASIC7.98□□□□□ -1.13
Trim11Q99PQ2 Gm6877-201ENSMUST00000119347 1101 ntBASIC7.98□□□□□ -1.13
Trim11Q99PQ2 Gm8421-201ENSMUST00000119439 305 ntBASIC7.98□□□□□ -1.13
Trim11Q99PQ2 Gm5387-201ENSMUST00000119776 857 ntBASIC7.98□□□□□ -1.13
Trim11Q99PQ2 Gm14989-201ENSMUST00000120497 207 ntBASIC7.98□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms