Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm13357-201ENSMUST00000120528 537 ntBASIC6.29□□□□□ -1.4
Msh4Q99MT2 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Msh4Q99MT2 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC6.29□□□□□ -1.4
Msh4Q99MT2 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC6.29□□□□□ -1.4
Msh4Q99MT2 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Gm24812-201ENSMUST00000175315 284 ntBASIC6.29□□□□□ -1.4
Msh4Q99MT2 Gm37857-201ENSMUST00000191784 1199 ntBASIC6.29□□□□□ -1.4
Msh4Q99MT2 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.29□□□□□ -1.4
Msh4Q99MT2 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC6.29□□□□□ -1.4
Msh4Q99MT2 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Gm45514-201ENSMUST00000211531 689 ntBASIC6.29□□□□□ -1.4
Msh4Q99MT2 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Msh4Q99MT2 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Msh4Q99MT2 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Msh4Q99MT2 AC125190.2-201ENSMUST00000221160 497 ntBASIC6.29□□□□□ -1.4
Msh4Q99MT2 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Msh4Q99MT2 AC123658.1-201ENSMUST00000228364 867 ntBASIC6.29□□□□□ -1.4
Msh4Q99MT2 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Msh4Q99MT2 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.29□□□□□ -1.4
Msh4Q99MT2 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.29□□□□□ -1.4
Msh4Q99MT2 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Msh4Q99MT2 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Msh4Q99MT2 Gm42613-201ENSMUST00000199975 1931 ntBASIC6.29□□□□□ -1.4
Msh4Q99MT2 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC6.28□□□□□ -1.4
Msh4Q99MT2 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Msh4Q99MT2 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Msh4Q99MT2 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Msh4Q99MT2 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Msh4Q99MT2 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Msh4Q99MT2 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Msh4Q99MT2 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Msh4Q99MT2 AC155234.1-201ENSMUST00000225610 2823 ntBASIC6.28□□□□□ -1.4
Msh4Q99MT2 AC124183.1-201ENSMUST00000222367 2135 ntBASIC6.28□□□□□ -1.4
Msh4Q99MT2 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC6.28□□□□□ -1.4
Msh4Q99MT2 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Msh4Q99MT2 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Msh4Q99MT2 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Msh4Q99MT2 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Msh4Q99MT2 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Msh4Q99MT2 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Msh4Q99MT2 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Msh4Q99MT2 Gm22284-201ENSMUST00000104132 132 ntBASIC6.28□□□□□ -1.4
Msh4Q99MT2 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Msh4Q99MT2 Gm14614-201ENSMUST00000119873 384 ntBASIC6.28□□□□□ -1.4
Msh4Q99MT2 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC6.28□□□□□ -1.4
Msh4Q99MT2 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Msh4Q99MT2 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Msh4Q99MT2 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC6.28□□□□□ -1.4
Msh4Q99MT2 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Msh4Q99MT2 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Msh4Q99MT2 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Msh4Q99MT2 Gm24236-201ENSMUST00000157794 134 ntBASIC6.28□□□□□ -1.4
Msh4Q99MT2 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC6.28□□□□□ -1.4
Msh4Q99MT2 Gm20691-201ENSMUST00000176889 333 ntBASIC6.28□□□□□ -1.4
Msh4Q99MT2 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC6.28□□□□□ -1.4
Msh4Q99MT2 Gm28023-201ENSMUST00000184556 60 ntBASIC6.28□□□□□ -1.4
Msh4Q99MT2 Gm27825-201ENSMUST00000184586 60 ntBASIC6.28□□□□□ -1.4
Msh4Q99MT2 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC6.28□□□□□ -1.4
Msh4Q99MT2 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC6.28□□□□□ -1.4
Msh4Q99MT2 Ighv10-4-201ENSMUST00000193702 299 ntBASIC6.28□□□□□ -1.4
Msh4Q99MT2 Gm43048-201ENSMUST00000196101 388 ntBASIC6.28□□□□□ -1.4
Msh4Q99MT2 Gm29784-201ENSMUST00000196217 406 ntBASIC6.28□□□□□ -1.4
Msh4Q99MT2 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC6.28□□□□□ -1.4
Msh4Q99MT2 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.28□□□□□ -1.4
Msh4Q99MT2 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC6.28□□□□□ -1.4
Msh4Q99MT2 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC6.28□□□□□ -1.4
Msh4Q99MT2 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC6.28□□□□□ -1.4
Msh4Q99MT2 Gm18586-201ENSMUST00000217265 518 ntBASIC6.28□□□□□ -1.4
Msh4Q99MT2 AC154904.1-201ENSMUST00000219510 312 ntBASIC6.28□□□□□ -1.4
Msh4Q99MT2 AC126554.4-201ENSMUST00000221055 409 ntBASIC6.28□□□□□ -1.4
Msh4Q99MT2 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC6.28□□□□□ -1.4
Msh4Q99MT2 Zmym2-202ENSMUST00000223669 1281 ntBASIC6.28□□□□□ -1.4
Msh4Q99MT2 AV026068-220ENSMUST00000224153 1147 ntBASIC6.28□□□□□ -1.4
Msh4Q99MT2 AV026068-224ENSMUST00000224827 928 ntBASIC6.28□□□□□ -1.4
Msh4Q99MT2 AC159267.1-201ENSMUST00000226702 678 ntBASIC6.28□□□□□ -1.4
Msh4Q99MT2 AC174678.3-201ENSMUST00000227568 362 ntBASIC6.28□□□□□ -1.4
Msh4Q99MT2 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Msh4Q99MT2 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Msh4Q99MT2 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Msh4Q99MT2 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Msh4Q99MT2 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms