Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.41□□□□□ -1.38
Trub1Q8C0D0 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trub1Q8C0D0 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trub1Q8C0D0 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trub1Q8C0D0 Gm13176-201ENSMUST00000117910 477 ntBASIC6.41□□□□□ -1.38
Trub1Q8C0D0 Gm6977-201ENSMUST00000121568 512 ntBASIC6.41□□□□□ -1.38
Trub1Q8C0D0 Calr-ps-201ENSMUST00000121776 485 ntBASIC6.41□□□□□ -1.38
Trub1Q8C0D0 Mir1960-201ENSMUST00000157488 78 ntBASIC6.41□□□□□ -1.38
Trub1Q8C0D0 Gm18700-201ENSMUST00000185791 553 ntBASIC6.41□□□□□ -1.38
Trub1Q8C0D0 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trub1Q8C0D0 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC6.41□□□□□ -1.38
Trub1Q8C0D0 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trub1Q8C0D0 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trub1Q8C0D0 Gm4332-201ENSMUST00000196114 346 ntBASIC6.41□□□□□ -1.38
Trub1Q8C0D0 Gm5027-201ENSMUST00000206700 375 ntBASIC6.41□□□□□ -1.38
Trub1Q8C0D0 Gm6070-201ENSMUST00000207275 419 ntBASIC6.41□□□□□ -1.38
Trub1Q8C0D0 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC6.41□□□□□ -1.38
Trub1Q8C0D0 Gm45448-201ENSMUST00000211739 209 ntBASIC6.41□□□□□ -1.38
Trub1Q8C0D0 CT009713.1-201ENSMUST00000224828 853 ntBASIC6.41□□□□□ -1.38
Trub1Q8C0D0 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trub1Q8C0D0 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Trub1Q8C0D0 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trub1Q8C0D0 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trub1Q8C0D0 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Trub1Q8C0D0 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Trub1Q8C0D0 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Trub1Q8C0D0 Gm37894-201ENSMUST00000195416 2599 ntBASIC6.41□□□□□ -1.38
Trub1Q8C0D0 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Trub1Q8C0D0 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trub1Q8C0D0 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Trub1Q8C0D0 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Trub1Q8C0D0 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trub1Q8C0D0 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trub1Q8C0D0 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trub1Q8C0D0 AC130831.1-201ENSMUST00000224546 1474 ntBASIC6.41□□□□□ -1.38
Trub1Q8C0D0 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Gm44440-201ENSMUST00000203139 2373 ntBASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trub1Q8C0D0 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.4□□□□□ -1.38
Trub1Q8C0D0 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Gm25564-201ENSMUST00000104604 132 ntBASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Gm12439-201ENSMUST00000117162 365 ntBASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Gm12369-201ENSMUST00000121343 942 ntBASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Gm26167-201ENSMUST00000158423 253 ntBASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Gm16269-201ENSMUST00000160532 409 ntBASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Gm21614-201ENSMUST00000183260 1005 ntBASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Gm37135-201ENSMUST00000192652 534 ntBASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Gm17934-201ENSMUST00000192818 422 ntBASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Gm6119-201ENSMUST00000193443 1206 ntBASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Gm37838-201ENSMUST00000194464 312 ntBASIC6.4□□□□□ -1.38
Trub1Q8C0D0 BC049739-201ENSMUST00000202626 660 ntBASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Gm18290-201ENSMUST00000202900 844 ntBASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Gm30646-201ENSMUST00000207662 180 ntBASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Gm3785-201ENSMUST00000221000 202 ntBASIC6.4□□□□□ -1.38
Trub1Q8C0D0 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.4□□□□□ -1.38
Trub1Q8C0D0 AC154527.1-201ENSMUST00000225809 242 ntBASIC6.4□□□□□ -1.38
Trub1Q8C0D0 AC129537.1-201ENSMUST00000226596 1228 ntBASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Gm26442-201ENSMUST00000082588 153 ntBASIC6.4□□□□□ -1.38
Trub1Q8C0D0 n-R5s58-201ENSMUST00000093682 119 ntBASIC6.4□□□□□ -1.38
Trub1Q8C0D0 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Trub1Q8C0D0 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.4□□□□□ -1.39
Trub1Q8C0D0 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Trub1Q8C0D0 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Trub1Q8C0D0 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Trub1Q8C0D0 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Trub1Q8C0D0 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Trub1Q8C0D0 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Trub1Q8C0D0 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Trub1Q8C0D0 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Trub1Q8C0D0 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trub1Q8C0D0 AC161247.1-201ENSMUST00000217744 2295 ntBASIC6.39□□□□□ -1.39
Trub1Q8C0D0 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trub1Q8C0D0 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trub1Q8C0D0 Gm13870-201ENSMUST00000117214 1023 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms