Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 AC120347.2-201ENSMUST00000222224 2015 ntBASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Gm43707-201ENSMUST00000196451 3187 ntBASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Gm14579-201ENSMUST00000117068 283 ntBASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Gm21542-201ENSMUST00000182307 993 ntBASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Gm37376-201ENSMUST00000192176 453 ntBASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Gm18985-201ENSMUST00000196472 1079 ntBASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Gm17824-201ENSMUST00000197690 805 ntBASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Gm43974-201ENSMUST00000205080 684 ntBASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Gm21089-201ENSMUST00000215843 325 ntBASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 CT030254.1-201ENSMUST00000225450 1078 ntBASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 CT025538.2-201ENSMUST00000226083 772 ntBASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 AC102139.1-201ENSMUST00000227000 251 ntBASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Gm43719-201ENSMUST00000200088 2199 ntBASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Gm37082-201ENSMUST00000192629 1927 ntBASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sh3rf2Q8BZT2 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Gm15950-201ENSMUST00000162902 1973 ntBASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Gm14158-201ENSMUST00000118409 308 ntBASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Gm13626-201ENSMUST00000119435 402 ntBASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Mup-ps15-201ENSMUST00000121741 539 ntBASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Gm29509-201ENSMUST00000185716 321 ntBASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Gm37463-201ENSMUST00000193819 796 ntBASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Ighv1-10-201ENSMUST00000194372 355 ntBASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Igkv12-67-201ENSMUST00000197806 354 ntBASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Gm19269-201ENSMUST00000211401 804 ntBASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 AC161250.1-201ENSMUST00000213426 1111 ntBASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Gm18329-201ENSMUST00000215832 589 ntBASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Gm5831-201ENSMUST00000216016 1209 ntBASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 AC153532.1-201ENSMUST00000218126 1111 ntBASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 AC118006.2-201ENSMUST00000224167 962 ntBASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 CT025525.2-201ENSMUST00000227743 423 ntBASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 AC151902.1-201ENSMUST00000227800 375 ntBASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Gm45457-201ENSMUST00000209931 3089 ntBASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Sh3rf2Q8BZT2 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 107.8 ms