Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm8895-201ENSMUST00000172300 1223 ntBASIC8.79□□□□□ -1
Usp40Q8BWR4 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC8.79□□□□□ -1
Usp40Q8BWR4 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC8.79□□□□□ -1
Usp40Q8BWR4 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC8.79□□□□□ -1
Usp40Q8BWR4 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC8.79□□□□□ -1
Usp40Q8BWR4 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC8.79□□□□□ -1
Usp40Q8BWR4 Gm27460-201ENSMUST00000184213 100 ntBASIC8.79□□□□□ -1
Usp40Q8BWR4 Gm28195-201ENSMUST00000186992 372 ntBASIC8.79□□□□□ -1
Usp40Q8BWR4 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC8.79□□□□□ -1
Usp40Q8BWR4 Gm6693-201ENSMUST00000189583 813 ntBASIC8.79□□□□□ -1
Usp40Q8BWR4 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC8.79□□□□□ -1
Usp40Q8BWR4 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC8.79□□□□□ -1
Usp40Q8BWR4 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC8.79□□□□□ -1
Usp40Q8BWR4 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC8.79□□□□□ -1
Usp40Q8BWR4 Gm38097-201ENSMUST00000192936 439 ntBASIC8.79□□□□□ -1
Usp40Q8BWR4 Gm37355-201ENSMUST00000193345 606 ntBASIC8.79□□□□□ -1
Usp40Q8BWR4 Gm8454-201ENSMUST00000196980 811 ntBASIC8.79□□□□□ -1
Usp40Q8BWR4 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC8.79□□□□□ -1
Usp40Q8BWR4 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC8.79□□□□□ -1
Usp40Q8BWR4 Gm30694-201ENSMUST00000209278 1230 ntBASIC8.79□□□□□ -1
Usp40Q8BWR4 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC8.79□□□□□ -1
Usp40Q8BWR4 AC124569.4-201ENSMUST00000223830 1220 ntBASIC8.79□□□□□ -1
Usp40Q8BWR4 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Usp40Q8BWR4 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC8.79□□□□□ -1
Usp40Q8BWR4 Gm5612-201ENSMUST00000053326 375 ntBASIC8.79□□□□□ -1
Usp40Q8BWR4 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Usp40Q8BWR4 Gm22126-201ENSMUST00000083244 142 ntBASIC8.79□□□□□ -1
Usp40Q8BWR4 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Usp40Q8BWR4 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC8.79□□□□□ -1
Usp40Q8BWR4 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC8.79□□□□□ -1
Usp40Q8BWR4 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC8.79□□□□□ -1
Usp40Q8BWR4 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Usp40Q8BWR4 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Usp40Q8BWR4 Gm232-201ENSMUST00000216549 2559 ntBASIC8.78□□□□□ -1
Usp40Q8BWR4 Gm43496-201ENSMUST00000201682 3001 ntBASIC8.78□□□□□ -1
Usp40Q8BWR4 AC140280.1-201ENSMUST00000227826 1847 ntBASIC8.78□□□□□ -1
Usp40Q8BWR4 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Usp40Q8BWR4 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Usp40Q8BWR4 Gm23440-201ENSMUST00000104299 130 ntBASIC8.78□□□□□ -1
Usp40Q8BWR4 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC8.78□□□□□ -1
Usp40Q8BWR4 Gm14158-201ENSMUST00000118409 308 ntBASIC8.78□□□□□ -1
Usp40Q8BWR4 Gm14294-201ENSMUST00000119749 751 ntBASIC8.78□□□□□ -1
Usp40Q8BWR4 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC8.78□□□□□ -1
Usp40Q8BWR4 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC8.78□□□□□ -1
Usp40Q8BWR4 Gm4207-201ENSMUST00000173144 960 ntBASIC8.78□□□□□ -1
Usp40Q8BWR4 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC8.78□□□□□ -1
Usp40Q8BWR4 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC8.78□□□□□ -1
Usp40Q8BWR4 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Usp40Q8BWR4 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC8.78□□□□□ -1
Usp40Q8BWR4 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC8.78□□□□□ -1
Usp40Q8BWR4 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC8.78□□□□□ -1
Usp40Q8BWR4 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC8.78□□□□□ -1
Usp40Q8BWR4 AC154633.1-201ENSMUST00000223276 449 ntBASIC8.78□□□□□ -1
Usp40Q8BWR4 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
Usp40Q8BWR4 Gm8526-201ENSMUST00000079153 475 ntBASIC8.78□□□□□ -1
Usp40Q8BWR4 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC8.78□□□□□ -1
Usp40Q8BWR4 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC8.78□□□□□ -1
Usp40Q8BWR4 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC8.78□□□□□ -1
Usp40Q8BWR4 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Usp40Q8BWR4 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC8.78□□□□□ -1
Usp40Q8BWR4 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC8.78□□□□□ -1
Usp40Q8BWR4 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Usp40Q8BWR4 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC8.78□□□□□ -1
Usp40Q8BWR4 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC8.77□□□□□ -1
Usp40Q8BWR4 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Usp40Q8BWR4 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC8.77□□□□□ -1
Usp40Q8BWR4 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Usp40Q8BWR4 Gm37570-201ENSMUST00000195411 3106 ntBASIC8.77□□□□□ -1.01
Usp40Q8BWR4 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Usp40Q8BWR4 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Usp40Q8BWR4 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Usp40Q8BWR4 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
Usp40Q8BWR4 Gm16074-201ENSMUST00000119524 444 ntBASIC8.77□□□□□ -1.01
Usp40Q8BWR4 Mup-ps15-201ENSMUST00000121741 539 ntBASIC8.77□□□□□ -1.01
Usp40Q8BWR4 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Usp40Q8BWR4 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Usp40Q8BWR4 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Usp40Q8BWR4 Gm37265-201ENSMUST00000191698 885 ntBASIC8.77□□□□□ -1.01
Usp40Q8BWR4 Gm37490-201ENSMUST00000195566 724 ntBASIC8.77□□□□□ -1.01
Usp40Q8BWR4 Gm34701-202ENSMUST00000204685 360 ntBASIC8.77□□□□□ -1.01
Usp40Q8BWR4 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC8.77□□□□□ -1.01
Usp40Q8BWR4 Gm44830-201ENSMUST00000207667 584 ntBASIC8.77□□□□□ -1.01
Usp40Q8BWR4 Gm44861-201ENSMUST00000208325 1220 ntBASIC8.77□□□□□ -1.01
Usp40Q8BWR4 Gm45734-201ENSMUST00000211916 411 ntBASIC8.77□□□□□ -1.01
Usp40Q8BWR4 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC8.77□□□□□ -1.01
Usp40Q8BWR4 AC161250.1-201ENSMUST00000213426 1111 ntBASIC8.77□□□□□ -1.01
Usp40Q8BWR4 Gm7780-201ENSMUST00000214787 406 ntBASIC8.77□□□□□ -1.01
Usp40Q8BWR4 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC8.77□□□□□ -1.01
Usp40Q8BWR4 AC153532.1-201ENSMUST00000218126 1111 ntBASIC8.77□□□□□ -1.01
Usp40Q8BWR4 AC122371.2-201ENSMUST00000220583 366 ntBASIC8.77□□□□□ -1.01
Usp40Q8BWR4 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Usp40Q8BWR4 Gm9292-201ENSMUST00000222008 710 ntBASIC8.77□□□□□ -1.01
Usp40Q8BWR4 AC132918.1-201ENSMUST00000227877 925 ntBASIC8.77□□□□□ -1.01
Usp40Q8BWR4 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Usp40Q8BWR4 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Usp40Q8BWR4 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Usp40Q8BWR4 Olfr467-201ENSMUST00000084756 927 ntBASIC8.77□□□□□ -1.01
Usp40Q8BWR4 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Usp40Q8BWR4 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Usp40Q8BWR4 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 959.9 ms