Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Chmp2bQ8BJF9 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Chmp2bQ8BJF9 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Chmp2bQ8BJF9 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Chmp2bQ8BJF9 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.42□□□□□ -1.38
Chmp2bQ8BJF9 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Gm37725-201ENSMUST00000193965 2125 ntBASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Gm43503-201ENSMUST00000200033 3408 ntBASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Gm24989-201ENSMUST00000104461 88 ntBASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Gm8855-201ENSMUST00000118888 878 ntBASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Gm11517-201ENSMUST00000119491 387 ntBASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Gm6081-201ENSMUST00000134472 489 ntBASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Gm23756-201ENSMUST00000157582 114 ntBASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Gm23968-201ENSMUST00000175047 125 ntBASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Mir5617-201ENSMUST00000176786 57 ntBASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Gm8860-201ENSMUST00000193160 445 ntBASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Gm37477-201ENSMUST00000195215 884 ntBASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Gm3549-201ENSMUST00000203873 794 ntBASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Gm18586-201ENSMUST00000217265 518 ntBASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 AC161275.1-201ENSMUST00000224668 208 ntBASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Gm6436-201ENSMUST00000077163 451 ntBASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Gm10540-201ENSMUST00000097581 276 ntBASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Gm45657-201ENSMUST00000211318 1349 ntBASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Gm42503-201ENSMUST00000199080 3706 ntBASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Gm15789-201ENSMUST00000118992 1359 ntBASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Chmp2bQ8BJF9 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Rnu11-201ENSMUST00000104135 134 ntBASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Gm24790-201ENSMUST00000104285 132 ntBASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Gm15750-201ENSMUST00000120970 616 ntBASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Gm12535-201ENSMUST00000121025 484 ntBASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Gm7289-201ENSMUST00000168993 734 ntBASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Gm6489-201ENSMUST00000178167 696 ntBASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Mir6769b-201ENSMUST00000184793 60 ntBASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Gm29383-201ENSMUST00000188284 480 ntBASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Gm21577-201ENSMUST00000190823 697 ntBASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Gm37770-201ENSMUST00000192855 772 ntBASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Gm19088-201ENSMUST00000198800 566 ntBASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Igkv4-77-201ENSMUST00000199410 352 ntBASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Gm29778-201ENSMUST00000201667 466 ntBASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Gm44253-201ENSMUST00000203387 628 ntBASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Gm5027-201ENSMUST00000206700 375 ntBASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 AC155266.1-201ENSMUST00000220762 904 ntBASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Gm7557-201ENSMUST00000221935 865 ntBASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 AC163631.1-201ENSMUST00000225041 598 ntBASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 AC157572.1-201ENSMUST00000227187 825 ntBASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.4□□□□□ -1.38
Chmp2bQ8BJF9 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Chmp2bQ8BJF9 Gm37100-201ENSMUST00000193344 1353 ntBASIC6.4□□□□□ -1.39
Chmp2bQ8BJF9 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Chmp2bQ8BJF9 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Chmp2bQ8BJF9 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms