Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim41Q5NCC3 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Gm12844-201ENSMUST00000119463 582 ntBASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Gm12321-201ENSMUST00000121485 804 ntBASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Gm22882-201ENSMUST00000157749 124 ntBASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Gm8895-201ENSMUST00000172300 1223 ntBASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Gm20702-201ENSMUST00000176181 460 ntBASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Gm8305-201ENSMUST00000180022 1195 ntBASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Gm27013-201ENSMUST00000182441 1024 ntBASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Gm17965-201ENSMUST00000193904 517 ntBASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Gm37288-201ENSMUST00000193963 334 ntBASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Gm43762-201ENSMUST00000201521 295 ntBASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Gm4574-201ENSMUST00000207804 542 ntBASIC12.89□□□□□ -0.35
Trim41Q5NCC3 CU024910.1-201ENSMUST00000214310 418 ntBASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Tep1-201ENSMUST00000006444 8171 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim41Q5NCC3 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Gm11733-201ENSMUST00000092394 2311 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Gm38099-201ENSMUST00000193280 3170 ntBASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Tcp10c-201ENSMUST00000097403 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Mars2-201ENSMUST00000061334 11294 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trim41Q5NCC3 Veph1-201ENSMUST00000029419 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Olfr943-204ENSMUST00000213830 8305 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Olfr212-201ENSMUST00000075756 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Tubgcp6-202ENSMUST00000109353 7635 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Zfp507-201ENSMUST00000061586 6693 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm42576-201ENSMUST00000202336 2846 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm42969-201ENSMUST00000199858 3631 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Snord116l9-201ENSMUST00000101891 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm26504-201ENSMUST00000102033 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm12026-201ENSMUST00000120961 1024 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm11472-201ENSMUST00000121305 556 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm11895-201ENSMUST00000122165 467 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm22258-201ENSMUST00000177645 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm26502-201ENSMUST00000177732 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Snord116l13-201ENSMUST00000177737 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm25350-201ENSMUST00000177849 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Snord116l15-201ENSMUST00000177940 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm23446-201ENSMUST00000177977 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Snord116l4-201ENSMUST00000177982 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm26201-201ENSMUST00000178047 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm24711-201ENSMUST00000178062 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm24609-201ENSMUST00000178166 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm23265-201ENSMUST00000178321 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm22812-201ENSMUST00000178329 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Snord116l3-201ENSMUST00000178370 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm26246-201ENSMUST00000178388 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm22131-201ENSMUST00000178415 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm25155-201ENSMUST00000178450 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm24760-201ENSMUST00000178530 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm26032-201ENSMUST00000178535 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm22285-201ENSMUST00000178576 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm22776-201ENSMUST00000178634 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm22417-201ENSMUST00000178656 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Snord116l2-201ENSMUST00000178675 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm26270-201ENSMUST00000178690 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Snord116l16-201ENSMUST00000178777 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm25074-201ENSMUST00000178782 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm25210-201ENSMUST00000178813 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm25157-201ENSMUST00000178914 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm23313-201ENSMUST00000178931 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Snord116l17-201ENSMUST00000178936 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm23089-201ENSMUST00000178947 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm22046-201ENSMUST00000179027 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Snord116l10-201ENSMUST00000179053 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm26365-201ENSMUST00000179177 94 ntBASIC12.88□□□□□ -0.35
Trim41Q5NCC3 Gm23767-201ENSMUST00000179278 94 ntBASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms